Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06812 ATGGCAGAATTGATGGTTGCAGGAGCAGTTCTTACCCCTATCATTCAACTTACTATTGAGAGTCTTGCCTCAAAATATTTCAAAGACCTCTTCAATAAACGGTTGCTGGAAAAACTTAAAATCACATTGAATTCTATCAGCAAAGTCTTGGAAGATGCAGAGACAAAGCAGTACCAGAAAGATGAGGTGAGGATTTGGCTTGACAATCTAAAGCATGAGGTATATGAAGTAGATCAGCTGTTGGATGAGATTGCTGCTAGTGCACGAAAAACGAGCAAGAGCAAGGTTAAATGCTTTAGCACATTTTTGCCAAATCAGTTTAAATCTAGGATCAAAGACTTGCTCGATAAGCTAGAAGATCTTTTAAAGCAGAGTGATGTTATGGGATTGAATGAAGGAACAAGTGCTCGTAATGAAGTTGAAGTCGGTCCAAATTTTTCAAAAAGACCGCCAACGACGTCTTTGGTGGATGAATCTCTCATATGTGGTAGAAGGGATGAAAAGGAGAACATTGTCAGTTTCTTACTTTTAGACAATGGTAGTAGTAGCAACCACACACCAATACTCAGCATAATTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCGGCTCGTCTACAATGACAACAAGGTGCAACAGTGCTTTGAACTTAAAGCTTGGGTCTATGTTTCAAATCCATTTGATATTACCAGGCTCACTAAAGAAATCCTCGAGCAATTTAATTCTTCACCAAATAGTGAAAGCTTGGAAATACTCCAACGTCAATTGCAACATACAGTAACAGGCAAGAAATGTTTGCTTGTTCTAGATGATATTTGGAACGCAAATGAGAAAAGTTGGAAGCATTTACTAACTCCCTTTAACAAAGGATCTTCTGGAAGTAAAATTATTGTGACAACACGAAATAAGGACGATGCATTAGCCATGGAATCTGCCGAGTTATTTGAATTAAAACAATTGGGGGAGACTGATTGTTGGAATTTATTTGTGACACATGCTTTTCGCAACAAAAACGTGAGTGAATATCCAGATTATGAATCAATTGGAAGGATGATTCTAGACGACAAGTGTGGAGGGTTGCCATTAGCCGTGGAATCAATGGGGAAGCTCTTGAGAAGAAAATTCTCCAAAAATGAATGGGATAAAATATTGAAGACTGATATGTGGTGTTTATCAGAGAGAGACAGTGACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCCATTTCGAAGCGTTGTTTTGCTTATTGTTCCATGTTTCCCAGGGGTTATACGTTTCAAAAGAACAATTTAATCAATCTTTGGATGACATATGGTTTGCTAAACTCTTACAAAAGTGTCAAAAGTAAAGAAGAGTTGGGTAGTGAATCGTTTGAAGATCTTGAATCAATTTCATTTTTCCAAAGATCACTAGATTTTGATGGTTGTTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAATCAGAGTCTCGAGAGTTTTGCTTACAAGTAGAGGGTGATAAGGTGCGAGATACATCTGAAAGGACACGCCACATTTGGTGCTCTCTTGATTTGAAAGCCGGCGATGGGATATTAAAGCACATTTATAAAGCTAAGGGATTACATGGCTTGTTGGTAGAACCACCAAGAGATGGTAGCAAATCCTTCATGATAAGCAAAAATGTGCAATGTGATATGTTTTCAAAGCTAAAATATTTGCGGATGTTGTCATATTGTGGTTATAGAAATGAAACCAGAGAGTTAGAGCTAGCAGATGAGATAGACAATCTAAAGCTTTTGCGCTATCTAGACCTGAGTTGGACAACAATTAAAAGGTTGCCTGATTCTATCTGTAAGCTTTATAATTTAGAGACACTGATATTGGAAGGATGTGATAATTTGACAAAATTTCCTTTAGATTTTTACAAACTTGACCGTTTGCGCCATCTTAATCTGAAAGGAAATGAAATAAAGAAGATGCCAGAGAAGATGAGGAAACTAAATAACCTACAAACGTTGACTGACTTTGTTGTGGGAGAGCCAAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCATGGAAAAATTAGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGAGTCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACTATTCAGAACTACAATGGCAATATGTTTCCAAATTGGCTAAGTGGTTGTGATTTACCCGACTTAGTATCTCTTAAACTGCAGAACTGTAAAGGAATAAAGATCTTTGGCAATACCTCAACAAATGTTCCGTCTGAATGGCTAAGTGGGTTTCCTCGACTTAAAGAGTTGTATATATATGATTGTCCCAAATTGAAAAGAGTATTGCCCCAACACCTTCCTTCATTACAGAAGTTGGAGATTATTAATTGTGAGATGCTGGTTGTATCAATTCCCAATTGTGATAATATCATAAGGGCTTGTCATTTACCCAACTTAATATCTCTTAAACTTCAGAAATGTAAAGGAATAAAGATCTTTGGCAATAACTCAACAAATGTTCCGTTCAAGTTCCTTGAAGTTTTGGAATTTAACTCCTTGTCTGAATGGGAGGAATGGTTATGTATTGAAGGGTTTCCTCAGCTTAAAGAGCTTTACATAAGAGATTGTCCCAAATTGAAAAGAGCACTCCCTCCACACCTTCCTTCATTAGAGAAATTGGTGATTAGGCATTGCAAAATGCTGGACATATCAATTCCCAAGTGTGATAACATGATAGAGTTAATAATATCGAATTGCGATCAAATTTTGATAAATGAGTTGTCATCCAGCTTGAAAAAGTTCAGACTTGATGGAAATCAGTACGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCATTCTGGAAGAGTTGAAGTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTGAATTTGTGTTGTTATAATTCTCTGTCAGAACTTTCAATAACAGGATGGAAGTCCTCCTCCTTGTCTATTTCACTACACTTGTTCACCAATCTAAATTCTCTATGCTTGTTGGATTGTCCAAACCTGGAGTCTTTTCCTATGGGAGGTTTGCCTTCCAAGTTGTGGTCCCTTAAAATACACAATTGTCCAAAATTAATTGCTTCCAGAGAGGAGTGGGGTTTATTCCAACTCAATTCTCTGATTGATTTCCATGTCAGTGATGACTTTGAAAACGTGGAGTCCTTCCCAGAGGAGAATCTACTGCCGCACACTCTCAAGTATCTTTGGATGTCAGAATGTTTAAAGCTAAGAATAATGAATTGCAAGGGTTTTCTCCACCTCAAATCTCTCAGTCAAATATCTATTAATAACTGCCCTAGTCTTGAGAGTTTGCCGGAGGAGGGTCTACCCAACTCCCTTTCTCATTTGTACATTGAAAAGTGTCCATTGCTTGAAGAGAAGTACAAAAAGGAGGGAGGAAAGCAATGGCATACAATTCGTCACATCCCTTATGTGCTTATTAACGGTTATGTGCAGCAAATTATTTACTGA 3624 0.3767 MAELMVAGAVLTPIIQLTIESLASKYFKDLFNKRLLEKLKITLNSISKVLEDAETKQYQKDEVRIWLDNLKHEVYEVDQLLDEIAASARKTSKSKVKCFSTFLPNQFKSRIKDLLDKLEDLLKQSDVMGLNEGTSARNEVEVGPNFSKRPPTTSLVDESLICGRRDEKENIVSFLLLDNGSSSNHTPILSIIGLGGMGKTTLARLVYNDNKVQQCFELKAWVYVSNPFDITRLTKEILEQFNSSPNSESLEILQRQLQHTVTGKKCLLVLDDIWNANEKSWKHLLTPFNKGSSGSKIIVTTRNKDDALAMESAELFELKQLGETDCWNLFVTHAFRNKNVSEYPDYESIGRMILDDKCGGLPLAVESMGKLLRRKFSKNEWDKILKTDMWCLSERDSDINPVLRLSYHNLPSISKRCFAYCSMFPRGYTFQKNNLINLWMTYGLLNSYKSVKSKEELGSESFEDLESISFFQRSLDFDGCFVMHDLVNDLAKSESREFCLQVEGDKVRDTSERTRHIWCSLDLKAGDGILKHIYKAKGLHGLLVEPPRDGSKSFMISKNVQCDMFSKLKYLRMLSYCGYRNETRELELADEIDNLKLLRYLDLSWTTIKRLPDSICKLYNLETLILEGCDNLTKFPLDFYKLDRLRHLNLKGNEIKKMPEKMRKLNNLQTLTDFVVGEPSGSDIEELESLNLLHGKISLSGLNNVTDPTHAVKSRLQDKKFLEEIHMIFDGSVVESNVSVLDALQPNNNLKRLTIQNYNGNMFPNWLSGCDLPDLVSLKLQNCKGIKIFGNTSTNVPSEWLSGFPRLKELYIYDCPKLKRVLPQHLPSLQKLEIINCEMLVVSIPNCDNIIRACHLPNLISLKLQKCKGIKIFGNNSTNVPFKFLEVLEFNSLSEWEEWLCIEGFPQLKELYIRDCPKLKRALPPHLPSLEKLVIRHCKMLDISIPKCDNMIELIISNCDQILINELSSSLKKFRLDGNQYVEFSMDHLINNPILEELKLDFKDFVECPSLNLCCYNSLSELSITGWKSSSLSISLHLFTNLNSLCLLDCPNLESFPMGGLPSKLWSLKIHNCPKLIASREEWGLFQLNSLIDFHVSDDFENVESFPEENLLPHTLKYLWMSECLKLRIMNCKGFLHLKSLSQISINNCPSLESLPEEGLPNSLSHLYIEKCPLLEEKYKKEGGKQWHTIRHIPYVLINGYVQQIIY 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06812 1207 Pfam Rx N-terminal domain 11 94 IPR041118 -
Vivi3g06812 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 421 IPR027417 -
Vivi3g06812 1207 FunFam Probable disease resistance protein At1g61300 147 314 - -
Vivi3g06812 1207 Coils Coil 36 56 - -
Vivi3g06812 1207 PRINTS Disease resistance protein signature 824 840 - -
Vivi3g06812 1207 PRINTS Disease resistance protein signature 188 203 - -
Vivi3g06812 1207 PRINTS Disease resistance protein signature 260 274 - -
Vivi3g06812 1207 PRINTS Disease resistance protein signature 358 372 - -
Vivi3g06812 1207 Gene3D - 407 495 IPR036388 -
Vivi3g06812 1207 Gene3D Ribonuclease Inhibitor 949 1195 IPR032675 -
Vivi3g06812 1207 Gene3D Ribonuclease Inhibitor 553 852 IPR032675 -
Vivi3g06812 1207 Gene3D Ribonuclease Inhibitor 853 948 IPR032675 -
Vivi3g06812 1207 Pfam NB-ARC domain 183 386 IPR002182 GO:0043531
Vivi3g06812 1207 Gene3D - 149 315 IPR027417 -
Vivi3g06812 1207 PANTHER DISEASE RESISTANCE PROTEIN RP 36 849 IPR044974 GO:0006952
Vivi3g06812 1207 Gene3D - 320 406 IPR042197 -
Vivi3g06812 1207 SMART LRR_typ_2 595 618 IPR003591 -
Vivi3g06812 1207 SMART LRR_typ_2 642 665 IPR003591 -
Vivi3g06812 1207 SUPERFAMILY L domain-like 482 942 - -
Vivi3g06812 1207 SUPERFAMILY L domain-like 889 1188 - -
Vivi3g06812 1207 Gene3D - 21 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06812 Vivi-Chr3 192310564 192332299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06812 579 671 WRKY Transcription Factor Family AT4G12020 40.426 7.83e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06812 - - vvo:131593174 2442.54