Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06809 ATGAATTTCATCAAGAAAACTTTTGTTCATGAAGATTTTGCTGCTGAATCTCGAGTTGTTAGTGAAAGGGTTCAAAATCCTGTACTGAATTTGAAGCAACAACTAATTTCAAATCCAATTGCAATTTTATCTATGATTCTCAATATACCATTTTCTTTCACAGGAGATCATAACTTCAATTTGTTTACTCACATATTGATAGGTACAGCTGTACCGGGTTTCAATATTCCAACTTTCAATCAGGAATTTGTGAAAAAGAAGTTCCACTCAAACAAAGTAGCCCTTTTCAAGCTAGAACATCTTTTAAAGCAAAATGATGTGTTGGGATTGAAAGAAGGAACATCTGCTCGTAATGGACTTGAAGTCGGTCCAGGATCTTCAAAAAGAGTGCCAACAACGTCTTTGGTGGATGAATCTAGAATACTTGGTAGAAATGGTGATAAAGAGGAAATTATTGATTTCTTACTTTTAGACAATGGTAGTGGTTGCAACCACGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTAGGCTCGTCTACAATGACGACAAGGTGCAAACCAGCTTTGAACTTAAAGCTTGGGTTTATGTTTCAAATCCATTTGATATTTTTGGGCTCACTAAAGAAATTCTCGAGCAATTTAATTCTCCAACAGATAGTGAAAGCTTGGAAATACTTCAACGTCAATTGCAACAGATAGTAATGGGAAAGAAATATTTGCTTGTTCTAGATGATATTTGGAAAGCTAATGAGAAAAGTTGGGAGCAGTTACTAATTCCCTTTAATAAAGGATCTTCTGGAAGTAAGATGATCGTGACAACACGAAGTAAGGATGATGCATCAGCCATGGAATCTGCCAAGTTAGTTGAATTAGAACAACTCGAGAAGAGTGATTGCTGGAGTTTATTTGTGACACATGCTTTTTACGACAGAAACGCAAGTGATTATCCAGATCTTGAACCAATTGGAAAGATGATTGTAGACAAGTGTGGAGGGTTGCCATTAGCTGTTAAAACAATGGGGAACCTCTTGAGAAAAAAATTCTCTAAAAGTGAATGGGAGAAAATATTGAAGACTGATATGTGGTGTTTATCAGAGAGAGACAGCAACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATATTGTTCCATATTTCCCAAGGGTTATATGTTTAACAAGAATAAGTTAATCAAAATGTGGATGGCAAATGGTTTTCTGAATTCCTACAAAAGTAACAAAAGTAAAAAAGAGTTGGGTAGTGAGTTATTTGATGATCTTGAGTCAATTTCATTTTTCCAAGAATCACTATATTTTCCTGGACTTTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAATCAGAGTCTAGAGAGTTTTGCTTAGAAGTGAAAGGTGATATGGGGCAAGATATATCTGAAAGGACACGCCACATTTGGTGTTCTCATGACACTAGTTGTGATTTGAAAGTCGGCGATGGGATATTAAAGCACATTTCTAAAGCTAAGGGATTACACAGCTTGTTGGTAGAATCACCAAGGTATGGTGGCAAATGCTTCATGATAAGCAACAATATGCAATGTGATATGTTTTCAAAATTAAAATATTTGCGGATGTTATCATTTAGTGATTACAAAAATGCATCCGGAGAGCTAGAACTAGCGGATGAGATAGGGAGTTTAAATCTTTTGCGCTATCTAGACCTGTCTTGGACAAATATTAAAAGGATACCCGACTCTATCTGTAAGCTTTATAACTTGGAGAGACTGGAATTGGAAGGGTGTGATAATTTGACTGAATTTCCTTTAGATTTTTACAAACTTGACCGTTTAGGCCATCTTAATTTGGAAGGAACTCCAATAAAGAAGATGCCAAAGAACATAAGGAAACTAAACCATCTACAAACACTGACTAATTTTGTTGTGGGAGAGTCGAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAAATTAGTCTTTCAGGATTGAACAATGTCACGGATCCTACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTATTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGACTCACTATCCAGAACTACAATGGCAATATGTTTCCAACTTGGATAAGGGGATGTGATTTACCCAATTTAATATCTCTTAAACTTCAGAACTGTAATGGAATAAAGATCTTTGGCAATAACTCAACAAATGTTCCATTCAAGTTCCTTGAAGTTTTGAAATTTGTCTGTTTGTCTGAATGGGAGGAATGGGTATGTATTGAAGGGTTTCCTCGGCTTAAAGAGATTTCTATAAATGATTGTCCAAAATTGAAAAGGGTATCACTGCCTCAACATCTTCCTTCATTACAAAAATTGATGATTGGGGATTGTGAAATGCTAGACGTATCATTTCCCAATTTTGATAATATCATAGAGTTAGATATATGGAGTTGTGGGCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAAGATTTCAGAGTTGAGGGAAATCAGTACGTTGAGTTTTCCATGGATCATTTAATTAACAATCCCAATTTGGAAGAGTTGGAGTTGGATTTCAAGGACTTTGTAGAATACCCCTCAATGGATTTGTGTTGTTATAATTCTCTGTCAAAACTTTCAATAAAAGGATGGAAGTTCTCCTCCTTGCCTTTTTCACTACACTTGTTCCCCAATCTTGAATATCTAGAAATCCGTGATTGTCCAGAATTAGAATCTTTTTCTATGGGAGGTTTGCCTTCAAACTTGAGCTGCCTTACAATATATAATTGCCCAAAACTAATTGCTTCCAGAGAGAAGTGGGGTTTGTTCCAACTCAATTCTCTATATTACTTCACTGTTAGTGATGATTTTGAAAACGTGGAGTCCTTCCCCGAGCAGAACCTACTGCCACCAACTCTGAAAGTTCTTACATTGGATAAATGTTCAAAGCTAAGAATATTGAACTTCAGGGGATTTCTCCACCTCAAATCTCTTAGTAATATATGGATTGAAAATTGCCATAGTCTTGAGAGTTTGCCGGAGGAGGATCTACCCAACTCCCTTAGAGTATTATCAATTCTTAGTTGTCCATTACTCGAGGAGAAATACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTCGTCACATCCCTAATGTGAGCATTGACTTTATTTACCAGGATTGGATTGAGGGGTAG 3327 0.3664 MNFIKKTFVHEDFAAESRVVSERVQNPVLNLKQQLISNPIAILSMILNIPFSFTGDHNFNLFTHILIGTAVPGFNIPTFNQEFVKKKFHSNKVALFKLEHLLKQNDVLGLKEGTSARNGLEVGPGSSKRVPTTSLVDESRILGRNGDKEEIIDFLLLDNGSGCNHAPIISIVGLGGMGKTTLARLVYNDDKVQTSFELKAWVYVSNPFDIFGLTKEILEQFNSPTDSESLEILQRQLQQIVMGKKYLLVLDDIWKANEKSWEQLLIPFNKGSSGSKMIVTTRSKDDASAMESAKLVELEQLEKSDCWSLFVTHAFYDRNASDYPDLEPIGKMIVDKCGGLPLAVKTMGNLLRKKFSKSEWEKILKTDMWCLSERDSNINPVLRLSYHNLPSNSKRCFAYCSIFPKGYMFNKNKLIKMWMANGFLNSYKSNKSKKELGSELFDDLESISFFQESLYFPGLFVMHDLVNDLAKSESREFCLEVKGDMGQDISERTRHIWCSHDTSCDLKVGDGILKHISKAKGLHSLLVESPRYGGKCFMISNNMQCDMFSKLKYLRMLSFSDYKNASGELELADEIGSLNLLRYLDLSWTNIKRIPDSICKLYNLERLELEGCDNLTEFPLDFYKLDRLGHLNLEGTPIKKMPKNIRKLNHLQTLTNFVVGESSGSDIEELESLNLLQGKISLSGLNNVTDPTHAVKSRLQDKKYLEEIHMIFDGSVVESNVSVLDALQPNNNLKRLTIQNYNGNMFPTWIRGCDLPNLISLKLQNCNGIKIFGNNSTNVPFKFLEVLKFVCLSEWEEWVCIEGFPRLKEISINDCPKLKRVSLPQHLPSLQKLMIGDCEMLDVSFPNFDNIIELDIWSCGRILINELSSSLKDFRVEGNQYVEFSMDHLINNPNLEELELDFKDFVEYPSMDLCCYNSLSKLSIKGWKFSSLPFSLHLFPNLEYLEIRDCPELESFSMGGLPSNLSCLTIYNCPKLIASREKWGLFQLNSLYYFTVSDDFENVESFPEQNLLPPTLKVLTLDKCSKLRILNFRGFLHLKSLSNIWIENCHSLESLPEEDLPNSLRVLSILSCPLLEEKYKKEGGERWHTIRHIPNVSIDFIYQDWIEG 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06809 1108 Gene3D - 300 385 IPR042197 -
Vivi3g06809 1108 PANTHER DISEASE RESISTANCE PROTEIN RP 117 859 IPR044974 GO:0006952
Vivi3g06809 1108 PRINTS Disease resistance protein signature 240 254 - -
Vivi3g06809 1108 PRINTS Disease resistance protein signature 168 183 - -
Vivi3g06809 1108 PRINTS Disease resistance protein signature 599 615 - -
Vivi3g06809 1108 PRINTS Disease resistance protein signature 337 351 - -
Vivi3g06809 1108 SUPERFAMILY RNI-like 787 1075 - -
Vivi3g06809 1108 FunFam Probable disease resistance protein At1g61300 127 294 - -
Vivi3g06809 1108 Gene3D - 126 297 IPR027417 -
Vivi3g06809 1108 Gene3D - 386 474 IPR036388 -
Vivi3g06809 1108 Gene3D Ribonuclease Inhibitor 880 1081 IPR032675 -
Vivi3g06809 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 400 IPR027417 -
Vivi3g06809 1108 SUPERFAMILY L domain-like 461 855 - -
Vivi3g06809 1108 Pfam NB-ARC domain 147 365 IPR002182 GO:0043531
Vivi3g06809 1108 Gene3D Ribonuclease Inhibitor 537 879 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06809 Vivi-Chr3 192253581 192270369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06809 570 654 WRKY Transcription Factor Family AT4G12020 39.535 5.55e-06 48.9