Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06808 ATGGCAGGGCTGATGGTTGCGGGAGCGTTTCTTACACCTGTCATCCAAGTCATTGTTGAGAGGGTTGCCTCAGGAGATTACAAAGACATCTTCAGCAAACGATTGGTGAATAAACTTGAAATCACATTGAATTCTATCAACAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCAGAATCCAAATGTGAGGATATGGCTTGATCATATAAAACATGAGGTATATGAAGTAGATCAGCTGTTGGATGAGATTGCTACAAGTGCACAACGAAAGAGAAAGGTTAAACACTTCTTTTCATCTCTGACTAATCAGTTTGAATCTAGAATAAAAGACTTACTAGATAAGCTAGAATATCTTTTGAAGCAAAATGATGTGTTGGGATTGAAAGAAGGAACATGTGCTCGTAATGAAGTTGAAGTCGGTCTGATATCTTCGAAAAGACTACCAACGACGTCTCTGGTGGATGAATCTCGCATATGTGGTAGACAGAGTGAAAAGGAGAAAATTATCAGTTTCTTACTTTTAGACAATGGTAGTAGTAGCAACCACGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAAACCACCCTTGCTCAACTTGTCTACAATGAACAGGAGATTCAAAAGAGCTTTGAACTTAAAGCTTGGGTCTATGTTTCAACTTCATTTGATATTTTTCAGCTCACTAAAGAAATTCTTGAGCAATTTAATTCTGCACCAAATGGTGAAAGCTTGGAAATACTCCAACGTCGTTTGGAAGAGACGGTAACAGACAAAAAATATTTGCTTGTTCTAGATGATATTTGGAACACAAATGAGAAAAGTTTGGAGCAGTTACTAATTCCCTTTAACAAATGTTCTTGTGGAAGTAAGATTATTGTGACAACAAGAAGTAAAGATGATGCATTAGCCATGGATTCTGCCGAGTTACTTGAACTAGAAAAATTGAGGGAGAGTGATTGTTGGAGATTATTTGTGACACATGCTTTTCACGACAGAAATGTGAGTGAATATCCAGATCTTGAATCCATCGGAAGGCTGATTGTAGACAAGTGTGGAGGGTTGCCAATAGCCGTGAAAACAATGGGGAACCTCTTGAGAAAAAAATTCTCTAAAAGTGAATGGGAGAAAATATTGAAGACTGATATGTGGTGTTTATCAGAGAGAGACAGTGGCATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATACTGTTCCATATTTCCCAAGGGCTATATGTTTGACAAGAATGAGTTAATCAAAACGTGGATGGCAAATGGTTTGTTGAATTCCTACCAAAGTAACAAAAGTAAAGAAGAGTTGGGTAGTGAGTCATTTGATGATCTTGAGTCAATTTCATTTTTCCAAGTATCACTATATTTTCATGGTCATTTTGTCATGCATGATCTTGTCAATGAGTTGGCAAAATCAGAGTCTCGAGAGTTTTGCTTACAAGTAGAGGGTGATAAAGTGCAAGAGATATCTGAAAGGACACGCCACATTCGGTGTTCTCGTAATTTGAAAGCTGGCGATGGGATATTAAAGTATATTTATAAAGCTAAGGGATTACACAGTTTGTTGGTAGAAGATGGTGGCGAATGCTTCTTGAAAAGCAAAAATGTGCAATGTGATTTGTTTTCAAAGCTAAAATTTCTGCGGATGTTTTCATTTAGGGGTTATGGTTTTCCATATGAAAATCTAGAACTAGCAGATGAGATAGGCAGTTTAAATCTTTTGCGTTATGTAGACCTGTCTTGGACATATATTAAAAGGTTGCCCAACTCTATCTGTATGCTTTATAACTTAGAGAGATTGGAATTGGAAGGGTGTTATAATTTGACTGAATTTCCTTTAGATTTTTACAAACTTGACCGTTTAGGCCATCTTAATTTGGAAGGAACTGCAATAAAGAAGATGCCAAAGAAGATAAGAAAACTAACCCATCTACATACGCTGACTAATTTTGTTGTGGGAGAGTCGAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAAGTTTGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGATATTTAATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCTTTCTACCAAATAACAATCTGAAGAGGCTCACTATTGAGAATTACAGTGGCAATATGTTTCCAAATTGGCTAAGTGGATGTGATTTACCCAATTTAATATCTCTTAAACTGCAGAACTGTAATGGAATAAAGATCTTCGGCAATAACTCAACAAATGTTCCGTTCAAGTCCCTTGAAGTTTTGGAATTTAACTTCGTGTCTGAATGGGAGGAATGGTTATGTATTGATGGGTTTCCTTTGCTTAAAGAGCTTTCTATAACATGTTGTCCCAAATTGAAAGGAGCACTGCCTCAACACCTTCCTTCATTACAGAAATTGATGATTAGGGGTTGCAAAATGCTGGCCGTATCAATTCCCATTTGTGATAATATCATAGAGTTAAGAATATCGAATTGCGATCGAACTTTGATAAATGAGTTGTCATCCAACTTGAAAGAGTTCAGACTTGACGGAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAAAAATCCCATTCTGGAAGTGTTGGATTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTAGATTTGTGTTGTTATAATTCTCTTTCGTACCTTTCAATAACAGGTTGGCGGTTCTCCTCCTTACCTATTTCACTACACTTGTTCACCAATCTATGTATTCTAAAGTTGTTTGATTGTCCAAGGCTGGAGTCTTTTCCAATGGGGGGTTTGCCTTCCAACTTGGAGTCCCTTTTAATATACAATTGCCCAAAATTAATTGCTTCCAGAGAGGAGTGGGGTTTATTCCAACTCAATTCTTTGACTCATTTCATAGTTAGTGATGATTTTGAAAACGTGAAGTCATTCCCCGAGCAGAATCTACTGCCACCAACTCTCACGGATCTCTATTTTAGCAAATGTTCAAAGCTAAGAATATTGAACTACAAGGGATTTCTCCACCTCAAATCTCTTGGTAGTATATGGATTGACAACTGCCCTAGTCTTGAGAGTTTGCCGGAGGAAGGTCTACCCAACTCCCTTTATAATTTGTACATTGAAAATTGTCCATTACTTGAAGAAAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCACATCCCTAAAGTGAAGATTGACTGGATTGAGCAGCAATAG 3345 0.3752 MAGLMVAGAFLTPVIQVIVERVASGDYKDIFSKRLVNKLEITLNSINKVLDDAETKQYQNPNVRIWLDHIKHEVYEVDQLLDEIATSAQRKRKVKHFFSSLTNQFESRIKDLLDKLEYLLKQNDVLGLKEGTCARNEVEVGLISSKRLPTTSLVDESRICGRQSEKEKIISFLLLDNGSSSNHAPIISIVGLGGMGKTTLAQLVYNEQEIQKSFELKAWVYVSTSFDIFQLTKEILEQFNSAPNGESLEILQRRLEETVTDKKYLLVLDDIWNTNEKSLEQLLIPFNKCSCGSKIIVTTRSKDDALAMDSAELLELEKLRESDCWRLFVTHAFHDRNVSEYPDLESIGRLIVDKCGGLPIAVKTMGNLLRKKFSKSEWEKILKTDMWCLSERDSGINPVLRLSYHNLPSNSKRCFAYCSIFPKGYMFDKNELIKTWMANGLLNSYQSNKSKEELGSESFDDLESISFFQVSLYFHGHFVMHDLVNELAKSESREFCLQVEGDKVQEISERTRHIRCSRNLKAGDGILKYIYKAKGLHSLLVEDGGECFLKSKNVQCDLFSKLKFLRMFSFRGYGFPYENLELADEIGSLNLLRYVDLSWTYIKRLPNSICMLYNLERLELEGCYNLTEFPLDFYKLDRLGHLNLEGTAIKKMPKKIRKLTHLHTLTNFVVGESSGSDIEELESLNLLQGKVCLSGLNNVTDPTHAVKSRLQDKKFLEEIHMIFNGSVVESNVSVLDAFLPNNNLKRLTIENYSGNMFPNWLSGCDLPNLISLKLQNCNGIKIFGNNSTNVPFKSLEVLEFNFVSEWEEWLCIDGFPLLKELSITCCPKLKGALPQHLPSLQKLMIRGCKMLAVSIPICDNIIELRISNCDRTLINELSSNLKEFRLDGNQYVEFSMDHLIKNPILEVLDLDFKDFVECPSLDLCCYNSLSYLSITGWRFSSLPISLHLFTNLCILKLFDCPRLESFPMGGLPSNLESLLIYNCPKLIASREEWGLFQLNSLTHFIVSDDFENVKSFPEQNLLPPTLTDLYFSKCSKLRILNYKGFLHLKSLGSIWIDNCPSLESLPEEGLPNSLYNLYIENCPLLEEKYKKEGGERWHTISHIPKVKIDWIEQQ 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06808 1114 Pfam NB-ARC domain 163 383 IPR002182 GO:0043531
Vivi3g06808 1114 Gene3D - 404 491 IPR036388 -
Vivi3g06808 1114 FunFam Probable disease resistance protein At1g61300 145 312 - -
Vivi3g06808 1114 Gene3D Ribonuclease Inhibitor 528 874 IPR032675 -
Vivi3g06808 1114 Coils Coil 36 56 - -
Vivi3g06808 1114 Pfam Rx N-terminal domain 11 93 IPR041118 -
Vivi3g06808 1114 Gene3D Ribonuclease Inhibitor 875 1103 IPR032675 -
Vivi3g06808 1114 Gene3D - 32 119 - -
Vivi3g06808 1114 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g06808 1114 PRINTS Disease resistance protein signature 258 272 - -
Vivi3g06808 1114 PRINTS Disease resistance protein signature 835 851 - -
Vivi3g06808 1114 PRINTS Disease resistance protein signature 355 369 - -
Vivi3g06808 1114 PANTHER DISEASE RESISTANCE PROTEIN RP 36 869 IPR044974 GO:0006952
Vivi3g06808 1114 SUPERFAMILY L domain-like 479 851 - -
Vivi3g06808 1114 SUPERFAMILY L domain-like 836 1089 - -
Vivi3g06808 1114 Gene3D - 142 313 IPR027417 -
Vivi3g06808 1114 Gene3D - 318 403 IPR042197 -
Vivi3g06808 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06808 Vivi-Chr3 192209085 192269663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06808 581 665 WRKY Transcription Factor Family AT4G12020 39.535 4.75e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06808 - - vvo:131659621 1450.26