Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06807 ATGGCAGGATTGATGGTTGCTGGAGCATTTCTTACACCTGTCATTCAAGTTATTGTTGAAAGTGTTGCCTCAGGAGATTACAAAGACCTCTTCATTAAACGGTTGGTGAATAAACTTAAAATTAAATTGAATTCAATCCAGAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCATGACGAAAGGGTGAGGTTTTGGCTTGATAATCTAAAGCATGTGGTATATGAAGTAGAACAACTGTTGGACGAGATTGCTACAAGTGTACAACGGAAGTCAAAGGTTCATCGCTTTCGTTTAGTTGGCCATTTTAAATCTAAGATCAAGGTTTATTTCTTTCTTTTAGCTGGTCGATTTAAATCTAGGATCAATGATTTGCTAGATAAGCTAAACGTTCTTTTAGACGAAAAAGATTTTCTGGATTTGAAAGTAGGAATAATTGCTCATAATGAACTTTCAGAAAGAGTGCCAACCACGTCTTTGGTGGATGAATCTAGCAAATATGGTAGACAGGGTGAAAAAGAGGAAATTATCAGTTTCTTACTTTTAGAAAATGGTAGTAGTAGCAGCAACCAAGCATCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCAGCTTGTCTACAAAGACACCAGGGTGCAAAAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCATTTGATGTTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAATCTAAATTCACTCCAATGCCAATTGCAGCAGAAGATAACAGGAAAGAAGTGTTTGCTAGTTCTAGATGATATATGGAAAGTATATTGGGAAAGTTGTGAGAAGTTACTAAGTTTCTTTAATGAAGGATCTTCTGGAAGTAAGATTATTGTGACAACACGAAATAAGGAGAATGCATTCGCCATGGAATCTAAGTTATTTGAATTAGATAAATTGAAGGAGGGTGATTCTTGGAGTTTATTTGAACGACATGCTTTTCCTAACAAAAAAGCGAGTGAGTATCCAGAATTTGAACCAATTGGAAAGAGGATTGTTGGCAAGTGTGGAGGGTTGCCATTAGCCGTGATAACTATGGGGAAACTCTTGAGAGCAAAATTCTCTCAAAGTAAATGGATCGAAATATCGGAGAATGATATGTGGGGTTTATCAGAGAAAGACACTAGCATAAATCCAGTATTGAGACTGGGTTACCATAATCTTCCTTCCAATTTGAAGCCATGTTTTGCTTACTGTTCCATATTTCCTAAGGGTTATTATTTTGACAAGAATAAGTTAATCAAAATGTGGATGGCAAATGGTTTCCTGAATTCCTACAAAAGTGACAAAAGTAAAGAAGAGTTGGGTAGTGAATTATTCAATGATCTTGAGTCAGTTTCATTTTTTCAAAGATCACTAGATTTTGATGATTATTTTATCATGCATGATCTTGTAAATGACTTGGCAAAATCAGTGTCTCATAAGTTTTGCTTACAAGTGGAGGATGATAAGTTGCAGGATATAATTGAAACAACACGCCACATTGGGTGCTTTCTTGAGCTGGAAGATTTTGATGAAATTTTAAAGCATATTTATAGAGCTAAGGGAGTACACAGCTTGTTTGCAGAACGACCACCAGGAAGTGGCAAATGCTTCAGGATAAGCAACAGTATGCAATGTGATTTATTTTCAAAGCTAAAATATTTGCGGATGTTGTCATTTCGTGGGTATAGTGATCCACACAGTGAGTTAGAACTAGCAAATGAGATTGGCAATCTAAAGCTTTTGCGTTATCTAGACTTGTCTTGGACAACAATTAAAAGGTTGCCCAATTCTATCAGTAAGCTTTACAATTTAGAGACACTGATATTGGAATGTTGTTATTGTTTGACTGAATTTCCTTTAGATCTTTCCAAACTTGACCGTTTACGCCATCTTAATCTGAATGGAACTGCAATAAAAAAGATGCCAAAGAACATAAGTAAACTAAACCATTTACAAACTTTGGCTTACTTTGTTGTGGGAGAGCCGAGTGGTTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAGAACTTTGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGACCCGTTTGCAAGATAAAAAGTTTTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTAAACCAAATAAAAATCTGAAGAGGCTCACCATTAACAACTACAATGGCAATATGTTTCCAATTTGGCTAAGGGGTTGTGATTTACCCAACTTAATATCTCTTAAACTTAAGTATTGTCATGGAATAAAGATTTTTGGAAATAACTCAACAAATGTTCCGTTCAAGTTCCTTGAAGTTTTGGAATTTGACTGGATGTCGGAATGGGAGGAATGGTTATGTATTGAAGGGTTTCCCCGGCTTAAAGAGCTTTATATAGAAAATTGTCCCAAATTGAAAAGGGCATCACTGCCTCAACAACTTCCTTCATTACAGAAGTTGGTGATCAGATGGTGTGAAATGTTGGACGTATCAATTCCCAATTGTGATAATATCAAAGAGTTAGAACAATAA 2634 0.3622 MAGLMVAGAFLTPVIQVIVESVASGDYKDLFIKRLVNKLKIKLNSIQKVLDDAETKQYHDERVRFWLDNLKHVVYEVEQLLDEIATSVQRKSKVHRFRLVGHFKSKIKVYFFLLAGRFKSRINDLLDKLNVLLDEKDFLDLKVGIIAHNELSERVPTTSLVDESSKYGRQGEKEEIISFLLLENGSSSSNQASIISIVGLGGMGKTTLAQLVYKDTRVQKNFDLKAWVYVSESFDVIRLTKAILESFGSSPNTENLNSLQCQLQQKITGKKCLLVLDDIWKVYWESCEKLLSFFNEGSSGSKIIVTTRNKENAFAMESKLFELDKLKEGDSWSLFERHAFPNKKASEYPEFEPIGKRIVGKCGGLPLAVITMGKLLRAKFSQSKWIEISENDMWGLSEKDTSINPVLRLGYHNLPSNLKPCFAYCSIFPKGYYFDKNKLIKMWMANGFLNSYKSDKSKEELGSELFNDLESVSFFQRSLDFDDYFIMHDLVNDLAKSVSHKFCLQVEDDKLQDIIETTRHIGCFLELEDFDEILKHIYRAKGVHSLFAERPPGSGKCFRISNSMQCDLFSKLKYLRMLSFRGYSDPHSELELANEIGNLKLLRYLDLSWTTIKRLPNSISKLYNLETLILECCYCLTEFPLDLSKLDRLRHLNLNGTAIKKMPKNISKLNHLQTLAYFVVGEPSGSDIEELESLNLLQGELCLSGLNNVTDPTHAVKTRLQDKKFLEEIHMIFDGSVVESNVSVLDALKPNKNLKRLTINNYNGNMFPIWLRGCDLPNLISLKLKYCHGIKIFGNNSTNVPFKFLEVLEFDWMSEWEEWLCIEGFPRLKELYIENCPKLKRASLPQQLPSLQKLVIRWCEMLDVSIPNCDNIKELEQ 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06807 877 Gene3D - 146 322 IPR027417 -
Vivi3g06807 877 Gene3D - 411 498 IPR036388 -
Vivi3g06807 877 PANTHER DISEASE RESISTANCE PROTEIN RP 36 859 IPR044974 GO:0006952
Vivi3g06807 877 SUPERFAMILY L domain-like 487 873 - -
Vivi3g06807 877 Pfam Rx N-terminal domain 10 94 IPR041118 -
Vivi3g06807 877 Coils Coil 36 56 - -
Vivi3g06807 877 PRINTS Disease resistance protein signature 362 376 - -
Vivi3g06807 877 PRINTS Disease resistance protein signature 194 209 - -
Vivi3g06807 877 PRINTS Disease resistance protein signature 597 613 - -
Vivi3g06807 877 PRINTS Disease resistance protein signature 266 280 - -
Vivi3g06807 877 Pfam NB-ARC domain 172 390 IPR002182 GO:0043531
Vivi3g06807 877 Gene3D - 27 118 - -
Vivi3g06807 877 Gene3D - 325 410 IPR042197 -
Vivi3g06807 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Vivi3g06807 877 Gene3D Ribonuclease Inhibitor 556 877 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06807 Vivi-Chr3 192175112 192181559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06807 591 693 WRKY Transcription Factor Family AT4G12020 38.739 9.25e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06807 - - vvo:131593170 1751.1