Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06803 ATGGCAGGACTGATGGTTGCAGGAGCATTTCTTACACCTGTCATTCAAGTCATTGTTGAAAGAGTTGCCAAAAGAGATTACAAAAGCCTCTTCAATAAACGGTTGGTGAATAAACTTCAAATTAAATTGAATTCAATACAGAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCATGACGACAGGGTGAGGTTTTGGCTTGATAATCTAAAGCATGTGGTATATGAAGTAGAACAACTGTTGGATGAGATTGCTACAAGTGCACAAAGGAATTCCAAGGTTCACCACTTTCGTTTAGTTGGCCGATTTAAATCTAAGATCAAGGTTTCTTTCTTTCTTTTAGCTGGTCGATTTCGATCTAGGATCAACGATTTGCTAGACAAACTAAAAGATCTTTTAGACGAAAAGGATTTGCTGAATTTGAATGAAGGAATATTTGCTCGTAATGAACTTTCAGAAACAGTGCCAACGACGTCTTTGGTGGATGAATCTAGCAAATATGGTAGACAGGGTGAAACGGAGGAAATTATCAGTTTCATACTTTCAGACAATGGTAGTAGTAGCAGCAACCAAGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCAACTTGTCTACAAAGACCACAGGGTGCATAAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCATTTGATATTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAACCTAGATCTACTCCAATGTCAACTGCATGAAAAGATATCAGGAAAGAAATGTTTGCTTGTTCTAGATGATATTTGGAAAGTAGACTGGGAAAGTTGTGAGAGGTTACTAAGTTTCTTTAATGAAGGATCTTCTGGAAGTAAGATTATTGTGACAACACGAAATAAGAAGAACACATCAGCCATGGAATCTAAGTTTTTTGAATTATTTCAATTGGGAGAGATTGATTCTTGGAGTTTATTTGAGAGGCATGCTTTTTCAAACAAAAAAGGGAGTGAATATCCAGATCTTGAACCAATTGGAAAGAGGATTGTACGCAAGTGTGGAGGGTTGCCATTAGCCGTGATAACAATGGGGAAACTCTTGAGAGCAAAATTCTCTCAAAGTGAATGGATTGAAATATTGGAGAATGATATGTGGCGTGTATCAGAGAAAGACACTGGCATAAATCCAGTATTGAGATTGGGTTACCATAACCTTCCTTCCAATTTGAAGCCTTGTTTTGCATACTGTTCCATATTTCCCAAGGGTTATGAGTTTGACAAGAACACGTTAATCAAAATGTGGATGGCAAATGGTTTGTTGAATTCCTACAAAAGTGACAAAAGTAAAGAAGAGTGGGGTAATGAATTATTCAATGTTCTTGAGTCAATTTCATTTTTTCAAAGATCACTAGATTTTGATGGTGGTTTTATCATGCATGATCTTGTCAATGACTTGGCAAAATCAGTGTCTCGAGAGTTTTGCTTACAATTAGATGACGATAAGAAGGTAAATCACATATCTAAATGGACACGTCACATTTGGTTCTCTTTTGATTCGGAAGATGTGAATAGAATATTAAAGCACATTTATAGAAGTAAGGGATTACACAGCTTGTTGGTAGAACCCGAAAGATTCAATTGGACTAAGATAAGCAACAGTGTCCAATGTGATATATTTTCAAAACTAAAATATTTGCGGATGTTGTCATTTCCTGGTAGTCGGTTGTATTCACTCAAAAAGCTAGAGCTAGCAGATGAGATAGCCAATTTAAAGTTTTTGCGCTATCTAGACGTGTCTTGGACAACGATTGAAAGGTTGCCTAATTCTATTTGTAAGCTTTACAATTTAGAGACACTGATATTGGAAGGGTGTTCTAATTTGACTGAATTTCCTTTAGATTTTTTCAAACTTGACCGTTTAAGCCATCTTAATCTGGAAGGAACTGCAATAAAGAAGATTCCAAAGAACATGAGAAAACTAAATCATCTACAAACTTTGAATAACTTTGTTGTGGGGGAGCCTAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAACTTTGTCTTTCAGGATTGAACAATGTCACTGATGCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACCATTAAGAACTACAATGGCAATTTGTGTCCAAATTGGCTAAGTGGTTGTGATTTACCCAACTTAATATCTCTTAAATTGCAGAACTGTAAAGGAATAAAGATCTTTGGCAACAACTCAACAAATGTTCGGTTCAAGCTCCTTGAAGTTTTGAAATTTGACTGTATGTTTGAATGGGAGGAATGGTTATGTAACGAAGGATTTCCTATGCTTAAAGAGCTTTATATAAGAGATTGTCCTAATCTGAAAAGGGCACTTCCTTCACACCTTCCTTCATTACAGAAATTGGTGATTAAGGGTTGCAAAATGCTGGAGGTATCAATTCCCAATTGTGATAATATCATAGAGTTAGATATATGGAGATGTGATCGAATTTTGATAAATAAGTTGTCATCCAGCTTGAAAAGGTTTGTCCTTTGTGAAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCTAGTCTGAAAGAGTTGGAGTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTGAATTTGTGTTGTTATAATTCTCTTAATCGTCTTTCAATAAGAGGATGGAGGTCCTCCTCCTTGCCTATTCCACTATACTTGTTCAGCAAACTTGATTCTCTCATATTGTTAGATTGTCCAAGGCTGGAGTCTTTTCCTATGGGAGGTTTGCCTTCCTACTTGAACAACCTTGAAATACACAATTGCCGAAAATTAATTGCTTCCAGAGAGGAGTGA 3009 0.3672 MAGLMVAGAFLTPVIQVIVERVAKRDYKSLFNKRLVNKLQIKLNSIQKVLDDAETKQYHDDRVRFWLDNLKHVVYEVEQLLDEIATSAQRNSKVHHFRLVGRFKSKIKVSFFLLAGRFRSRINDLLDKLKDLLDEKDLLNLNEGIFARNELSETVPTTSLVDESSKYGRQGETEEIISFILSDNGSSSSNQAPIISIVGLGGMGKTTLAQLVYKDHRVHKNFDLKAWVYVSESFDIIRLTKAILESFGSSPNTENLDLLQCQLHEKISGKKCLLVLDDIWKVDWESCERLLSFFNEGSSGSKIIVTTRNKKNTSAMESKFFELFQLGEIDSWSLFERHAFSNKKGSEYPDLEPIGKRIVRKCGGLPLAVITMGKLLRAKFSQSEWIEILENDMWRVSEKDTGINPVLRLGYHNLPSNLKPCFAYCSIFPKGYEFDKNTLIKMWMANGLLNSYKSDKSKEEWGNELFNVLESISFFQRSLDFDGGFIMHDLVNDLAKSVSREFCLQLDDDKKVNHISKWTRHIWFSFDSEDVNRILKHIYRSKGLHSLLVEPERFNWTKISNSVQCDIFSKLKYLRMLSFPGSRLYSLKKLELADEIANLKFLRYLDVSWTTIERLPNSICKLYNLETLILEGCSNLTEFPLDFFKLDRLSHLNLEGTAIKKIPKNMRKLNHLQTLNNFVVGEPSGSDIEELESLNLLQGKLCLSGLNNVTDATHAVKSRLQDKKFLEEIHMIFDGSVVESNVSVLDALQPNNNLKRLTIKNYNGNLCPNWLSGCDLPNLISLKLQNCKGIKIFGNNSTNVRFKLLEVLKFDCMFEWEEWLCNEGFPMLKELYIRDCPNLKRALPSHLPSLQKLVIKGCKMLEVSIPNCDNIIELDIWRCDRILINKLSSSLKRFVLCENQYVEFSMDHLINNPSLKELELDFKDFVECPSLNLCCYNSLNRLSIRGWRSSSLPIPLYLFSKLDSLILLDCPRLESFPMGGLPSYLNNLEIHNCRKLIASREE 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06803 1002 Pfam NB-ARC domain 189 390 IPR002182 GO:0043531
Vivi3g06803 1002 SUPERFAMILY RNI-like 817 995 - -
Vivi3g06803 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 425 IPR027417 -
Vivi3g06803 1002 Gene3D - 21 122 - -
Vivi3g06803 1002 Pfam Rx N-terminal domain 10 93 IPR041118 -
Vivi3g06803 1002 Coils Coil 36 56 - -
Vivi3g06803 1002 Coils Coil 115 142 - -
Vivi3g06803 1002 Gene3D - 326 410 IPR042197 -
Vivi3g06803 1002 SUPERFAMILY L domain-like 487 861 - -
Vivi3g06803 1002 Gene3D - 146 321 IPR027417 -
Vivi3g06803 1002 Gene3D - 411 498 IPR036388 -
Vivi3g06803 1002 Gene3D Ribonuclease Inhibitor 530 894 IPR032675 -
Vivi3g06803 1002 PRINTS Disease resistance protein signature 362 376 - -
Vivi3g06803 1002 PRINTS Disease resistance protein signature 194 209 - -
Vivi3g06803 1002 PRINTS Disease resistance protein signature 620 636 - -
Vivi3g06803 1002 PRINTS Disease resistance protein signature 266 280 - -
Vivi3g06803 1002 PANTHER DISEASE RESISTANCE PROTEIN RP 36 883 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06803 Vivi-Chr3 192108724 192124976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06803 591 693 WRKY Transcription Factor Family AT4G12020 35.135 1.81e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06803 - - vvo:131593170 1380.54