Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06802 ATGGCAGGACTGATGGTTGCTGGAGCATTTCTTACACCTGTCATTCAAGTTATTGTTGAAAGTGTTGCCTCAGGAGATTACAAAGACCTCTTCATTAAACGGTTGGTGAATAAACTTAAAATTAAATTGAATTCAATCCAGAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCATGACGAAAGGGTGAGGTTTTGGCTTGATAATCTAAAGCATGTGGTATATGAAGTAGAACAACTGTTGGACGAGATTGCTACAAGTGTACAACGGAAGTCAAAGGTTCATCGCTTTCGTTTAGTTGGCCGTTTTAAATCTAAGATCAAGGTTTATTTCTTTCTTTTAGCTGGTCGATTTAAATCTAGGATCAATGATTTGCTAGACAAGCTAAACGTTCTTTTAGACGAAAAAGATTTTCTGGATTTGAAAGTAGGAATAATTGCTCATAATGAACTTTCAGAAAGAGTGCCAACCACGTCTTTGGTGGATGAATCTAGCAAATATGGTAGACAGGGTGAAAAAGAGGAAATTATCAGTTTCTTACTTTTAGAAAATGGTAGTAGTAGCAGCAACCAAGCATCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCAGCTTGTCTACAAAGACACCAGGGTGCAAAAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCATTTGATGTTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAATCTAAATTCACTCCAATGCCAATTGCAGCAGAAGATAACAGGAAAGAAGTGTTTGCTAGTTCTAGATGATATATGGAAAGTATATTGGGAAAGTTGTGAGAAGTTACTAAGTTTCTTTAATGAAGGATCTTCTGGAAGTAAGATTATTGTGACAACACGAAATAAGGAGAATGCATTCGCCATGGAATCTAAGTTATTTGAATTAGATAAATTGAAGGAGGGTGATTCTTGGAGTTTATTTGAACGACATGCTTTTCCCAACAAAAAAGCGAGTGAGTATCCAGAATTTGAACCAATTGGAAAGAGGATTGTTGGCAAGTGTGGAGGGTTGCCATTAGCCGTGATAACTATGGGGAAACTCTTGAGAGCAAAATTCTCTCAAAGTAAATGGATCGAAATATCGGAGAATGATATGTGGGGTTTATCAGAGAAAGACACTAGCATAAATCCAGTATTGAGACTGGGTTACCATAATCTTCCTTCCAATTTGAAGCCATGTTTTGCTTACTGTTCCATATTTCCTAAGGGTTATTATTTTGACAAGAATAAGTTAATCAAAATGTGGATGGCAAATGGTTTCCTGAATTCCTACAAAAGTGACAAAAGTAAAGAAGAGTTGGGTAGTGAATTATTCAATGATCTTGAGTCAGTTTCATTTTTTCAAAGATCACTAGATTTTGATGATTATTTTATCATGCATGATCTTGTAAATGACTTGGCAAAATCAGTGTCTCATAAGTTTTGCTTACAAGTGGAGGATGATAAGTTGCAGGATATAATTGAAACAACACGCCACATTGGGTGCTTTCTTGAGTTGGAAGATTTTGATGAAATTTTAAAGCACATTTATAGAGCTAAGGGAGTACACAGCTTGTTTGCAGAACGACCACCAGGAAGTGGCAAATGCTTCAGGATAAGCAACAGTATGCAATGTGATTTATTTTCAAAGCTAAAATATTTGCGGATGTTGTCATTTCGTGGGTATAGTGATCCACACAGTGAGTTAGAACTAGCAAATGAGATTGGCAATCTAAAGCTTTTGCGTTATCTAGACTTGTCTTGGACAACAATTAAAAGGTTGCCCAATTCTATCAGTAAGCTTTACAATTTAGAGACACTGATATTGGAATGTTGTTATTGTTTGACTGAATTTCCTTTAGATCTTTCCAAACTTGACCGTTTACGCCATCTTAATCTGAATGGAACTGCAATAAAAAAGATGCCAAAGAACATAAGTAAACTAAACCATTTACAAACTTTGGCTTACTTTGTTGTGGGAGAGCCGAGTGGTTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAGAACTTTGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGACCCGTTTGCAAGATAAAAAGTTTTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTAAACCAAATAAAAATCTGAAGAGGCTCACCATTAACAACTACAATGGCAATATGTTTCCAATTTGGCTAAGGGGTTGTGATTTACCCAACTTAATATCTCTTAAACTTAAGTACTGTCATGGAATAAAGATCTTTGGAAATAACTCAACAAATGTTCCGTTCAAGTTCCTTGAAGTTTTGGAATTTGACTGGATGTCGGAATGGGAGGAATGGTTATGTATTGAAGGGTTTCCCCGGCTTAAAGAGCTTTATATAGAAAATTGTCCCAAATTGAAAAGGGCATCACTGCCTCAACAACTTCCTTCATTACAGAAGTTGGTGATCAGATGGTGTGAAATGTTGGACGTATCAATTCCCAATTGTGATAATATCAAAGAGTTAGATATATCGAGATGTGATCGAGTTTTGATAAATAAGTTGTCATCCAGCTTGAAAAGGTTTGTCCTTTGTAAAAATCAGTATGTTGAGTTCTGCATGGAACATTTAATCAATAGTCCCAGTCTGGAAATGTTGAAGTTGGATTTCAAGGACTTTGTAAAATGTCCCTCATTGGATTTGTGTTGTTATAATTCTCTTTATAGTCTTTCAATAAAAGGATGGCAGTCCTCCTTGCCTTTTTCAGTACACTTGTTCCCCGGTCTTAATTCTCTTAGTTTGTCAAATTGTCCAAGGCTGGGGTCTTTTCCTATGGGAGGTTTGCCTTCCAACTTGGGGTACCTTAAAATACACAATTGCCCAAAATTAATTGCTTCTAGAGAGGAGTGGGGTTTATTCCAACTCAATTCTCTGACTATTTTCAGTGTTAAGGATGATTTTGAAATCGTGGAATCCTTCCCAGAGGAGGATCTACTACCCCAATCTCTCATGTATCTTTGGATGTCAAAATGTTCAAAGCTAAGAATAATAAACTGCAAGGGTTTTCTCCACCTCAAATCTCTCAGACAAATATATATTAAAAACTGCCCTGGTCTTGAGCTCTTGCCAGAGGAGAGTCTACCAAATTCTCTTAAAGAGTTGATGATTGAAGAATGTCCGTTACTTACGGAGAAGTACAAAAAGGAGGGAGGAGAGAGATGGCATACAATTAGTCACATCCCTGAAGTGATGATTGACGGTTATGTGCAGCAAATGATTGTCTGA 3384 0.3694 MAGLMVAGAFLTPVIQVIVESVASGDYKDLFIKRLVNKLKIKLNSIQKVLDDAETKQYHDERVRFWLDNLKHVVYEVEQLLDEIATSVQRKSKVHRFRLVGRFKSKIKVYFFLLAGRFKSRINDLLDKLNVLLDEKDFLDLKVGIIAHNELSERVPTTSLVDESSKYGRQGEKEEIISFLLLENGSSSSNQASIISIVGLGGMGKTTLAQLVYKDTRVQKNFDLKAWVYVSESFDVIRLTKAILESFGSSPNTENLNSLQCQLQQKITGKKCLLVLDDIWKVYWESCEKLLSFFNEGSSGSKIIVTTRNKENAFAMESKLFELDKLKEGDSWSLFERHAFPNKKASEYPEFEPIGKRIVGKCGGLPLAVITMGKLLRAKFSQSKWIEISENDMWGLSEKDTSINPVLRLGYHNLPSNLKPCFAYCSIFPKGYYFDKNKLIKMWMANGFLNSYKSDKSKEELGSELFNDLESVSFFQRSLDFDDYFIMHDLVNDLAKSVSHKFCLQVEDDKLQDIIETTRHIGCFLELEDFDEILKHIYRAKGVHSLFAERPPGSGKCFRISNSMQCDLFSKLKYLRMLSFRGYSDPHSELELANEIGNLKLLRYLDLSWTTIKRLPNSISKLYNLETLILECCYCLTEFPLDLSKLDRLRHLNLNGTAIKKMPKNISKLNHLQTLAYFVVGEPSGSDIEELESLNLLQGELCLSGLNNVTDPTHAVKTRLQDKKFLEEIHMIFDGSVVESNVSVLDALKPNKNLKRLTINNYNGNMFPIWLRGCDLPNLISLKLKYCHGIKIFGNNSTNVPFKFLEVLEFDWMSEWEEWLCIEGFPRLKELYIENCPKLKRASLPQQLPSLQKLVIRWCEMLDVSIPNCDNIKELDISRCDRVLINKLSSSLKRFVLCKNQYVEFCMEHLINSPSLEMLKLDFKDFVKCPSLDLCCYNSLYSLSIKGWQSSLPFSVHLFPGLNSLSLSNCPRLGSFPMGGLPSNLGYLKIHNCPKLIASREEWGLFQLNSLTIFSVKDDFEIVESFPEEDLLPQSLMYLWMSKCSKLRIINCKGFLHLKSLRQIYIKNCPGLELLPEESLPNSLKELMIEECPLLTEKYKKEGGERWHTISHIPEVMIDGYVQQMIV 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06802 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Vivi3g06802 1127 Gene3D - 411 498 IPR036388 -
Vivi3g06802 1127 Pfam NB-ARC domain 172 390 IPR002182 GO:0043531
Vivi3g06802 1127 Coils Coil 36 56 - -
Vivi3g06802 1127 PANTHER DISEASE RESISTANCE PROTEIN RP 36 1046 IPR044974 GO:0006952
Vivi3g06802 1127 Gene3D - 325 410 IPR042197 -
Vivi3g06802 1127 SUPERFAMILY RNI-like 805 1094 - -
Vivi3g06802 1127 Gene3D Ribonuclease Inhibitor 556 892 IPR032675 -
Vivi3g06802 1127 Gene3D - 146 321 IPR027417 -
Vivi3g06802 1127 Pfam Rx N-terminal domain 10 94 IPR041118 -
Vivi3g06802 1127 Gene3D Ribonuclease Inhibitor 893 1116 IPR032675 -
Vivi3g06802 1127 Gene3D - 28 118 - -
Vivi3g06802 1127 PRINTS Disease resistance protein signature 867 883 - -
Vivi3g06802 1127 PRINTS Disease resistance protein signature 194 209 - -
Vivi3g06802 1127 PRINTS Disease resistance protein signature 362 376 - -
Vivi3g06802 1127 PRINTS Disease resistance protein signature 266 280 - -
Vivi3g06802 1127 SUPERFAMILY L domain-like 487 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06802 Vivi-Chr3 192050935 192058107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06802 591 693 WRKY Transcription Factor Family AT4G12020 38.739 1.70e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06802 - - vvo:131593170 1744.94