Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06801 ATGGCAGAGCTGATGGTTGTGGGAGCGTTTCTTACACCTGTCATCCAAGTCATTGTTGAGAGGGTTGCCTCAGGAGATTACAAAGACATCTTCAGCAAACGATTGGTGAATAAACTTGAAATCACATTGAATTCTATCAACAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCAGAATCCAAATGTGAGGATATGGCTTGATCATATAAAACATGAGGTATATGAAGTAGATCAGTTGTTGGATGAGATTGCTACAAGTGCACAACGAAAGAGCAAGGTTAAACACTTCTTTTCATCTCTGACTAATCAGTTTGAATCTAGAATAAAAGACTTGCTAGATAAGCTAGAATATCTTTTGAAGCAAAATGATGTGTTGGGATTGAAAGAAGGAACATGTGCTCGTAATGAAGTTGAAGTCGGTCTGATATCTTCGAAAAGACTACCAACGACGTCTCTGGTGAATGAATCTCGCATATGTGGTAGACAAAGTGAAAAGGAGAAAATTATCAGTTTCTTACTTTTAGACAATGGTAGTAGTAGCAACCACGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAAACCACCCTTGCTCAACTTGTCTACAATGAACAGGAGATTCAAAAGAGCTTTGAACTTAAAGCTTGGGTCTATGTTTCAACTTCATTTGATATTTTGCGGCTCACTAAAGAAATTCTCGAGCAATTTAATTCTGCACCAAATAGTGAAAGCTTGGAAATACTCCAACGTCGATTGGAAAAGACGGTAACAGACAAAAAATATTTGCTTGTTCTAGATGATATTTGGAACGCAAATGAGAAAAGTTGGGAGCAGTTACTAATTCCCTTTAACAAATGTTCTTCTGGAAGTAAGATTATTGTGACAACAAGAAGTAAAGATGATGCATTAGCCATGGATTCTGCCAAGTTACTTGAACTAGCAAAATTGGGGGAGAGTGATTGTTGGAGTTTATTTGTGACACATGCTTTTCACGGAAGAAACGCGAGTGAATATCCAGATCTTGAATCCATCGGAAGGCTGATTGTAGACAAGTGTGGAGGGTTGCCAATAGCAGTGAAAACAATGGGGAACCTCTTGAGAAAAAAATTCTCTAAAAGCGAATGGGAGAAAATATTGAAGACTGATATGCGGTGTTTATCAGAGAAAGACAGTGACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATACTGTTCCATATTTCCCAAGGGTTATGAGTTTGACAAGAATGAGTTAATCAAAATGTGGATTGCAAATGGTTTGTTGAATTCCTACAAAAGTAACAAAAGTAAAGAAGAGTTGGGTAGTGAGTTATTTGATGATCTTGAGTCAATTTCATTTTTCCAAGTATCACTATATTTTGATGGTCGTTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAATCAGAGTCTCGAGAGTTTTGCTTACAAGTGAAGGATGAAAATATGCAAGATATATCTAAAAGGACACGCCACATTTGGTGTTCTCGTGATTTGAGAGTTGGCGATGGGATACTAAAACACATTTATAGAGCTAAGGGATTACACAGCTTGTTGGTAGAATCTCGAGATGGTGGCGAAAGCTTCATGATAAGCAATAATGTGCAATGTGATATGTTTTCAAAACTAAAATATTTGCGGATGTTGTCGTTTTGTTGTTATGGTTTTCCATTTGAAAATATAGAACTTGCAGATGAGATAGGCAGTTTAAATCTTTTGCGTTATTTAGACCTGTCTTGCACAACAATTAAAAGGTTGCCCGACTCTATCTGTAAGCTTTATAACTTAGAGAGACTGGAATTGAAAAGTTGTGGTAATTTGACTGAATTTCCTTTAGATTTTTACAAACTTGACCGTTTACGCCATCTTAATCTGGAAGGAGCTGCAATAAAGAAGATGCCAAAGAACATAAGGAAACTAAACCGTCTACAAACGTTGACTAACTTTGTTGTGGGAGAGCTGAGTGGGTTTAATATTGGGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAACTTTTTCTTTCAGGATTGAACAATGTCACGGATCCAACACATGCCATAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGATATTTGATGGTTTAGTAGTGGAAAGCCATGTGTCTGTATTGGATGCCCTTCAACCAAATAACAATCTAAAGAGGCTCACTATTCAGAACTACAATGGAAATATGTTTCCGAATTGGCTAACGGGTTATGATTTACCCAACTTAATATCTCTTAAACTGCAGAGCTGTAAAGGAATAAGGATATTTGGAAATAACGCAAAAGATGTTCCATTCAAGTTCCTTGAAGTTTTGGAATTTGACTCCTTGTCTGAATGGGAGGAATGGTTATGTATTGAAGGGTTTCCCCTGCTTAAAGAGCTTTACATAAGAGATTGTCCAAAATTGAAAGAAGGAACATATGCTCGTATTGAACTTTCAGAAAGAGTGCCAACGTCTTCTTTGGTGGATGAATCTAGCAAATGTGGTAGATATGGTGAAAAAGAGGAAATTATCAGTTTCTTACTTTTAGACAATAATAGTAGTAGTAGCAACCAGGTACCAGTAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCAGCTTGTCTACAAAGACCCCAGGGTGCAACAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCATTTGATGTTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAACCTAGATCGACTCCAATGTCAACTGCAGGAAAAGATAGCAGGAAAGAATTGTTTGCTTGTTCTAGATGATATCTGGAAAGTAGACTGGGAAAGTTGTGAAAGGTTACTAAGTTTCTTTAACGAAGGATCTTCTGGAAGTAAGATTGTTGTAACAACACGAAATAAGAAGAATGCATCAGCCATGGAATCTAAGTTTTTTGAATTATTTCAATTGGGAGAGATTGATTCTTGGAGTTTATTTGAGAGGCATGCTTTTTCAAACAAAAAAGGGAGTGAATATCCAGATCTTGAACCAATTGGAAAGAGGATTGTACGCAAGTGTGGAGGGTTGCCATTAGCCGTGATAACAATGGGGAAACTCTTGAGAGCGAAATTCTCTCAAAGTGAATGGATTGAAATATTGGAGGATGATATGTGGGGTTTATCAGAGAAAGACACTGGCATAAATCCAGTATTGAGATTGGGTTACCATAACCTTCCTTCCAATTTGAAGCCTTGTTTTGCATACTGA 3345 0.374 MAELMVVGAFLTPVIQVIVERVASGDYKDIFSKRLVNKLEITLNSINKVLDDAETKQYQNPNVRIWLDHIKHEVYEVDQLLDEIATSAQRKSKVKHFFSSLTNQFESRIKDLLDKLEYLLKQNDVLGLKEGTCARNEVEVGLISSKRLPTTSLVNESRICGRQSEKEKIISFLLLDNGSSSNHAPIISIVGLGGMGKTTLAQLVYNEQEIQKSFELKAWVYVSTSFDILRLTKEILEQFNSAPNSESLEILQRRLEKTVTDKKYLLVLDDIWNANEKSWEQLLIPFNKCSSGSKIIVTTRSKDDALAMDSAKLLELAKLGESDCWSLFVTHAFHGRNASEYPDLESIGRLIVDKCGGLPIAVKTMGNLLRKKFSKSEWEKILKTDMRCLSEKDSDINPVLRLSYHNLPSNSKRCFAYCSIFPKGYEFDKNELIKMWIANGLLNSYKSNKSKEELGSELFDDLESISFFQVSLYFDGRFVMHDLVNDLAKSESREFCLQVKDENMQDISKRTRHIWCSRDLRVGDGILKHIYRAKGLHSLLVESRDGGESFMISNNVQCDMFSKLKYLRMLSFCCYGFPFENIELADEIGSLNLLRYLDLSCTTIKRLPDSICKLYNLERLELKSCGNLTEFPLDFYKLDRLRHLNLEGAAIKKMPKNIRKLNRLQTLTNFVVGELSGFNIGELESLNLLQGKLFLSGLNNVTDPTHAIKSRLQDKKFLEEIHMIFDGLVVESHVSVLDALQPNNNLKRLTIQNYNGNMFPNWLTGYDLPNLISLKLQSCKGIRIFGNNAKDVPFKFLEVLEFDSLSEWEEWLCIEGFPLLKELYIRDCPKLKEGTYARIELSERVPTSSLVDESSKCGRYGEKEEIISFLLLDNNSSSSNQVPVISIVGLGGMGKTTLAQLVYKDPRVQQNFDLKAWVYVSESFDVIRLTKAILESFGSSPNTENLDRLQCQLQEKIAGKNCLLVLDDIWKVDWESCERLLSFFNEGSSGSKIVVTTRNKKNASAMESKFFELFQLGEIDSWSLFERHAFSNKKGSEYPDLEPIGKRIVRKCGGLPLAVITMGKLLRAKFSQSEWIEILEDDMWGLSEKDTGINPVLRLGYHNLPSNLKPCFAY 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06801 1114 Pfam NB-ARC domain 878 1080 IPR002182 GO:0043531
Vivi3g06801 1114 Pfam NB-ARC domain 163 384 IPR002182 GO:0043531
Vivi3g06801 1114 Pfam Rx N-terminal domain 11 93 IPR041118 -
Vivi3g06801 1114 SUPERFAMILY L domain-like 479 957 - -
Vivi3g06801 1114 Coils Coil 36 56 - -
Vivi3g06801 1114 Gene3D - 31 118 - -
Vivi3g06801 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 842 1114 IPR027417 -
Vivi3g06801 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 418 IPR027417 -
Vivi3g06801 1114 PRINTS Disease resistance protein signature 612 628 - -
Vivi3g06801 1114 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g06801 1114 PRINTS Disease resistance protein signature 258 272 - -
Vivi3g06801 1114 PRINTS Disease resistance protein signature 355 369 - -
Vivi3g06801 1114 FunFam Probable disease resistance protein At1g61300 144 312 - -
Vivi3g06801 1114 Gene3D - 142 313 IPR027417 -
Vivi3g06801 1114 Gene3D - 848 1012 IPR027417 -
Vivi3g06801 1114 SMART AAA_5 881 1020 IPR003593 GO:0016887
Vivi3g06801 1114 SMART AAA_5 183 320 IPR003593 GO:0016887
Vivi3g06801 1114 Gene3D Ribonuclease Inhibitor 542 847 IPR032675 -
Vivi3g06801 1114 Gene3D - 318 403 IPR042197 -
Vivi3g06801 1114 Gene3D - 1016 1105 IPR042197 -
Vivi3g06801 1114 PANTHER DISEASE RESISTANCE PROTEIN RP 36 825 IPR044974 GO:0006952
Vivi3g06801 1114 Gene3D - 404 492 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06801 Vivi-Chr3 192035708 192039676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06801 583 667 WRKY Transcription Factor Family AT4G12020 39.535 9.50e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06801 - - vvo:131593174 1238.4