Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06800 ATGGCAAATGGTTTGTTGAATTCCTACAAAAGTGACAAAAGTAAAGAAGAGTGGGGTAGTGAATTATTCAATGTTCTTGAGTCAATTTCATTTTTCCAAAGATCACTAGGTTTTGATGGTGGTTTTATCATGCATGATCTTGTCAATGACTTAGCAAAATCGGTGTCTCGAGAGTTTTGCTTACAAGTAGAGGATGATAAGAATGTAAATCACATTTCTAAATGGACACGCCACATTTGGTTCTCTTTTGATTCGGAAGATGCGGATAGAATATTAAAGCACACTTGTAGAAGTAAGGAATTACACAGCTTGTTGATAGAACCAAAAAGTTACAAATGGACCGAGATAAGCAACAATGTGCAATGTGATATATTTTCCAAACTAAAATATTTGCGGATGTTGTCATTTCTTGGTAGTAGGTCTTTACATACAAAGCTAGAGCTAGAGCTAGCAGATGAGATAGGCAATTTAAAGCTTTTGCGCTATCTAGACGTGTCTTGGACGAGTATTAATAGGTTGCCTGATTCTATTTGTAAGCTTTACAATTTAGAGACACTGATATTGGAAGGGTGTTCTAATTTGACTGAATTTCCTTTAGATTTTTGCAAACTTGACCATTTACGCCATCTTAATCTGGAAGGAACTGCAATAAGGAAGATGCCAAAGAACATAAGGAAACTAAACCATCTACAAACGTTGACTAATTTTTTTGTGGGAGAGTCGAGTGGGTCTGATATTGAGGACTTAGGAAGTCTCAATCTTCTTCAAGGAAAACTTTGTCTTTCAAGATTGAACAATGTCACGGATCCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGAAATTTGATATTTCAAGAATGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACTATCCAGAACTACAATGGCAATATGTTTCCAACTTGGATAAGGGGGTGTGATTTACCCAATTTAATATCTCTTAAACTGAAGAACTGTAATGGAATAAAGATCTTTGGCAATAACTCAACAAATGTTCCGTTCAAGTTCCTTGAAGTTTTGGAATTTAACGGGTTGTCTGAATGGGAAGAATGGTTATGTATCGAAGCGTTTCCACGGTTTAAAGAGCTTTCTATAACAAGTTGTCCCAAATTGAAAAGAGCATTCCCTCCACACCTTCCTTCATTACAGAAATTGGTGATTATATTAGCAGACTTACACACTAGCCCTACGTTGCATGAAGATAACATTTCCACCTTGCATGATGAGAATGAGTGCACACAGTAA 1323 0.3651 MANGLLNSYKSDKSKEEWGSELFNVLESISFFQRSLGFDGGFIMHDLVNDLAKSVSREFCLQVEDDKNVNHISKWTRHIWFSFDSEDADRILKHTCRSKELHSLLIEPKSYKWTEISNNVQCDIFSKLKYLRMLSFLGSRSLHTKLELELADEIGNLKLLRYLDVSWTSINRLPDSICKLYNLETLILEGCSNLTEFPLDFCKLDHLRHLNLEGTAIRKMPKNIRKLNHLQTLTNFFVGESSGSDIEDLGSLNLLQGKLCLSRLNNVTDPTHAVKSRLQDKKFLEEIHMKFDISRMESNVSVLDALQPNNNLKRLTIQNYNGNMFPTWIRGCDLPNLISLKLKNCNGIKIFGNNSTNVPFKFLEVLEFNGLSEWEEWLCIEAFPRFKELSITSCPKLKRAFPPHLPSLQKLVIILADLHTSPTLHEDNISTLHDENECTQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06800 440 Gene3D Ribonuclease Inhibitor 87 435 IPR032675 -
Vivi3g06800 440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 75 418 - -
Vivi3g06800 440 SUPERFAMILY L domain-like 44 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06800 Vivi-Chr3 192034343 192035665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06800 149 233 WRKY Transcription Factor Family AT4G12020 40.698 3.38e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06800 - - vvo:131659616 899.812