Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06796 ATGGCAGGGCTGATGGTTGCAGGAGCATTTCTTACACCTGTCATCCAAGTTATTGTTGAGAGGGTTGCCTCAGGAGATTACAAAGACATCTTCAAGAAACGAATGGTGAATAAACTTGAAATCACTTTGAATTCTATCAATCAAGTGTTGGATGATGCAGAGACAAAGCAGTACCAGAATCCAAATGTGAGGATTTGGCTTGACCATATAAAACATGAGGTATATGAAGTAGAACAACTGTTGGATGAGATTGCTTCAAGTGCACAACGAAAGAGCAAGGTTAAACACTTCTTTTCATCTCTGACTAATCAGTTTGAATCTAGGATGAAAGACTCGCTAGATAAGCTAGAACATCTTTTAAAGCAAAATGATGTGTTGGGATTGAAAGAAGGAACATCTGCTCGTAATGGACTTGAAGTCAGTTCAGAATCTTCAAAAAGAGTGCCAACAACGTCTTTGGTGGATGAATCTAGAATACTTGGTAGAAATGGTGATAAAGAGGAAATTATTGATTTCTTACTTTTAGACAATGGTAGTGGTTGCAACCACGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTAGGCTCGTCTACAATGACGACAAGGTGCAAAACAACTTTGAACTTAAAGCTTGGGTTTATGTTTCAAATCCATTTGATATTTTTGGGCTCACTAAAGAAATTCTCGAGCAATTTAAATCTCCAACAGATAGTGAAAGCTTGGAAATACTCCAACGTCAATTGCAACAGACACTAATGGGAAAAAAATATTTGCTTGTTCTAGATGATATTTGGAAAGCTAATGAGAAAAGTTGGGAGCAGTTACTAATTCCTTTTAATAAAGGATCTCCTGGAAGTAAGATGATCGTGACAACACGAAGTAAGGATGATGCATCAGCCATGGAATCTACAAAGTTAGTTGAATTAGAACAACTGGAGGAGAGTGATTGTTGGAATTTATTTGTGACACATGCTTTTCACGACAGAAACGCGAGTGATTATCCAGATCTTGAACCAATTGGAAAGATGATTGTAGACAAGTGTGGAGGGTTGCCATTAGCTGTTAAAACAATGGGGAACCTCTTGAGAAAAAAATTCTCTAAAAGTGAATGGGAGAAAATATTGAAGACTGATATGTGGTGTTTATCAGAGAGAGACAGCAACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATATTGTTCCATATTTCCCAAGGGTTATGAGTTTGACAAGAATAACAAAAGTAACAAAAGTAAAGAAGAGTTGGGTAGTGAATCGTTCGAAGATCTTGAATCAATTTCATTTTTCCAAAGAACTCCATATTCTGATAGTTGGTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAATCAGAGTCTAGAGAATTTTGCTTACAAGTGAATGGTGATACGGGGCAAGATATATCTGAAAGGACACGCCACATTTGGTGTTCTCTTGATTTGAAAGCCGGCGATGGGATATTAAAGCACATTTATAGAGCTAAGGGATTACACAGCTTGTTGGTAGAATCACCAACGTATGGTGGCGAATGCTTCATGATAAGCAACAATATGCAAGGTGATATGTTTTCAAAATTAAAATATTTGCGGATGTTATCATTTAGTGATTACGGAACTCCACACGGAGAGCTAGAACTAGCAGATGAGATAGGCAGTTTAAATCTTTTGCGCTATCTAGACCTGACTTGGACAGATATTACAAGGTTACCCGACTCTATCTGTAAGCTTTATAACTTAGAGAGACTGGAATTGAAAAACTGTGATAATTTGACTGAATTGCCTTTAGACTTTTACAAACTTGACGGTTTACGCCATCTTAATCTGGAAGGAACTGCAATAAAGAAAATGCCAAAGCAGATAAGGAAACTTAACCATCTAAAAACGCTGACTAATTTTGTTGTGGGAGAGTCGAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAAATTTGTCTTTCAGGATTGAACAATGTCACGGATCCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATTATATTTGATGGTTCTGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGACTCACTATCCAGAACTACAATGGCAATATGTTTCCATCTTGGATAAGGGGATGTGATTTACCCAATTTAATATCTCTTAAACTTCAGAACTGTAATGGAATAAAGATCTTTGGCAATAACTCCATAAATGATCCGTTCAAGTTCCTCGAAGTTTTGGAATTTGACTCCATGTCTGAATGGGAGGAAGGGATTTGTATTGAAGGGTTTCCTCGGCTTAAAGAGATTTCTATAAATGATTGTCCCAAATTGAAAAGGGTATCACTGCCTCAACATCTTCCTTCAATACAAAAATTGTTTATAGGTGGGTGCAAAATGGTGGACGTGTCAATTCTCAATTATGATAAAATCATAGTGTTGGATCTCCGGAATTATAAGCGGATTATGATAAATGAGTTGTCATCAAGCTTGAAAAGGTTTGTCCTTGGTAAAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCTTTCTGCGAGTGTTGTGGTTGGATTTTAAGGACTTGGTAGAATGTCCTTCGTTAGATTTGTGTTATAATTCTCTTCAGGATTTTTCCATAAGAGGATGGCAGTCCCCCTCGTTGCCTATTTCACTACACTTGTTCACCAATCTACGTTTTCTAAAGTTGTTGGATTGTCCAAGGCTGGAGTCTTTTCTTTTTGGAGGTTTGGCTTCCGAGTTGTGGTCCCTTGTAATATGCAATTGCCCAAAATTAATTGCTTCCAGAGAGGAGTGTGGTTTGTTCCAAATCAATTATGTATATACGTTTACGGTTAGTGATGATTTTGAAAACGTGGAATCCTTCCCCGAGCAGAATCTACTGCCACCAACTCTGAACCATCTTACCCTGGATAAATGTTCAAAGCTAAGAATATTGAACTACAAGGGATTTCTCCACCTCAATTCTCTTGGTACTATATGGATTTGCAACTGCCCTAGCCTTGAGAGTTTGCCGGAGGAGGGTCTACCCAATTCCCTTTCTGATTTGTACATTGAAAATTGTCCATTACTTTCAGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCATATCCCTACTGTGCGGATTGACGGTATTCATCAGCATTAG 3312 0.3801 MAGLMVAGAFLTPVIQVIVERVASGDYKDIFKKRMVNKLEITLNSINQVLDDAETKQYQNPNVRIWLDHIKHEVYEVEQLLDEIASSAQRKSKVKHFFSSLTNQFESRMKDSLDKLEHLLKQNDVLGLKEGTSARNGLEVSSESSKRVPTTSLVDESRILGRNGDKEEIIDFLLLDNGSGCNHAPIISIVGLGGMGKTTLARLVYNDDKVQNNFELKAWVYVSNPFDIFGLTKEILEQFKSPTDSESLEILQRQLQQTLMGKKYLLVLDDIWKANEKSWEQLLIPFNKGSPGSKMIVTTRSKDDASAMESTKLVELEQLEESDCWNLFVTHAFHDRNASDYPDLEPIGKMIVDKCGGLPLAVKTMGNLLRKKFSKSEWEKILKTDMWCLSERDSNINPVLRLSYHNLPSNSKRCFAYCSIFPKGYEFDKNNKSNKSKEELGSESFEDLESISFFQRTPYSDSWFVMHDLVNDLAKSESREFCLQVNGDTGQDISERTRHIWCSLDLKAGDGILKHIYRAKGLHSLLVESPTYGGECFMISNNMQGDMFSKLKYLRMLSFSDYGTPHGELELADEIGSLNLLRYLDLTWTDITRLPDSICKLYNLERLELKNCDNLTELPLDFYKLDGLRHLNLEGTAIKKMPKQIRKLNHLKTLTNFVVGESSGSDIEELESLNLLQGKICLSGLNNVTDPTHAVKSRLQDKKFLEEIHIIFDGSVVESNVSVLDALQPNNNLKRLTIQNYNGNMFPSWIRGCDLPNLISLKLQNCNGIKIFGNNSINDPFKFLEVLEFDSMSEWEEGICIEGFPRLKEISINDCPKLKRVSLPQHLPSIQKLFIGGCKMVDVSILNYDKIIVLDLRNYKRIMINELSSSLKRFVLGKNQYVEFSMDHLINNPFLRVLWLDFKDLVECPSLDLCYNSLQDFSIRGWQSPSLPISLHLFTNLRFLKLLDCPRLESFLFGGLASELWSLVICNCPKLIASREECGLFQINYVYTFTVSDDFENVESFPEQNLLPPTLNHLTLDKCSKLRILNYKGFLHLNSLGTIWICNCPSLESLPEEGLPNSLSDLYIENCPLLSEKYKKEGGERWHTISHIPTVRIDGIHQH 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06796 1103 SUPERFAMILY L domain-like 465 844 - -
Vivi3g06796 1103 Gene3D - 30 120 - -
Vivi3g06796 1103 Pfam NB-ARC domain 165 383 IPR002182 GO:0043531
Vivi3g06796 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 418 IPR027417 -
Vivi3g06796 1103 Gene3D Ribonuclease Inhibitor 867 1084 IPR032675 -
Vivi3g06796 1103 PANTHER DISEASE RESISTANCE PROTEIN RP 36 812 IPR044974 GO:0006952
Vivi3g06796 1103 Coils Coil 36 56 - -
Vivi3g06796 1103 PRINTS Disease resistance protein signature 258 272 - -
Vivi3g06796 1103 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g06796 1103 PRINTS Disease resistance protein signature 355 369 - -
Vivi3g06796 1103 PRINTS Disease resistance protein signature 599 615 - -
Vivi3g06796 1103 Pfam Rx N-terminal domain 11 93 IPR041118 -
Vivi3g06796 1103 Gene3D Ribonuclease Inhibitor 536 866 IPR032675 -
Vivi3g06796 1103 Gene3D - 404 478 IPR036388 -
Vivi3g06796 1103 Gene3D - 318 403 IPR042197 -
Vivi3g06796 1103 FunFam Probable disease resistance protein At1g61300 142 312 - -
Vivi3g06796 1103 SUPERFAMILY L domain-like 726 1088 - -
Vivi3g06796 1103 Gene3D - 141 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06796 Vivi-Chr3 191908310 191912688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06796 187 675 WRKY Transcription Factor Family AT5G45050 21.565 1.48e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06796 - - vvo:131659621 1613.59