Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06792 ATGGCAGGGCTGATGGTTGCAGGAGCATTTCTTACACCTGTCATCCAAGTAATTGTAGAGAGGGTTGTCTCAGGAGATTACAAAGACATCTTCAAGAAACGAATGGTGAATAAACTCGAAATCAATTTGAATTCTATCAATCAAGTGTTGGATGATGCAGAGACAAAGCAGTACCAGAATCCAAATGTGAGGATTTGGCTTGATGATATAAAACATGAGGTATATGAAGTAGAACAGCTGTTGGATGAGATTGCTACAAGTGCACAACGAAAGAGCAAAGTTAAACACTTCTTTTCATCTCTGACTAATCAGTTTGAATCTAGGATGAAAGACTCGCTAGATAAGCTAGAACATCTTTTAAAGCAAAATGATGTGGTGGGATTGAAAGAAGGAACATCTGCTCGTAATGGACTTGAAGTCGGTCCAGAATCTTCAAAAAGAGTGCCAACGACTTCTTTGGTGGATGAATCTAGAATACTTGGTAGAAATGGTGATAAAGAGGAAATTATTGATTTCTTACTTTTAGACAATGGTAGTATTTGCAACCACGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTCGGCTCGTCTACAATGACGACAAGGTGCAAAACAGCTTTGAACTTAAAGCTTGGGTTTATGTTTCAAATCCATTTGATATTTTTGGGCTCACTAAAGAAATTCTCGAGCAATTTAATTCTCCAACAGATGAAAGCTTGGAAATACTTCAACGTCAATTGCAACAGACCGTAATGGGAAAGAAATATTTGCTTGTTCTAGATGATATTTGGAAAGCTAATGAGAAAAGTTGGGAGCAGTTACTAATTCCTTTTAATAAAGGATCTTCTGGAAGTAAGATGATCGTGACAACACGAAGTAAGGATGATGCATCAGCCATGGATTCTGTCAAGTTAGTTGAATTAGAACAACTAGAGGAGAGTAATTGCTGGAGTTTATTTGTGACACATGCTTTTCAGGATAGAAACGTGAATGAATATCCAGATCTTGAATCAATTGGAAAGATGATAGTAGACAAGTGTGGAGGGTTGCCATTAGCTGTTAAAACAATGGGGAACCTCTTGAGAAAAAATTTCTCTAAAAATGAATGGGAGAAAATATTAAAGACTGATATGTGGCGTTTATCAGAGAGAGACAGTGACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATATTGTTCCATATTTCCCAAGGGTTATGAGTTTCACAAGAATGAGTTAATCAAAATGTGGATGGCAAATGGTTTGTTGAATTCCTACAAAAGTAACAAAAGTAAAGAAGAGTTGGGCAGTGAGTCATTTGATGATCTTGAGTCAATTTCATTTTTCCAAAGATCACTAGGTGGTAGTTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAATCAGAGTCTGGAGAGTTTTGCTTACAAGTCGAGGGTGAAAAGGTGCAAGAGATATCTGAAAGGACACGCCACATTTGGTGTTCTCGTAATTTGAAAGCCGGCGATGGGATATTAAAGCATATTTATAAAGCTAAGGGATTACACAGTTTGTTGGTAAACAGACGAGGAGATGGTGGCGAATGCTTCATGAAAAGCAACAATGTGCAATGTGATTTGTTTTCAAAGCTAAAATATTTGCGGATGTTGTCGTTTTGTGGTTTTGGTTTTTCATTTGAAAATCAAGAACTAGCTGATGAGATAGGTAGCTTAAATTCTTTACGTTATCTAGACCTGTCTTGGACAAATATTAAAAGGTTGCCCGACTCTATCTGTAAGCTTTATAACTTAGAGAGACTGGAATTGAAAGGGTGTCGTAATTTGACTGAATTTCCTTTAGATTTTTACAAACTTGACCATTTACGCCATCTTAATCTGGAAGGAACTGCAATAAAGAAAATGCCAAAGCAGATAAGGAAACTAAACCATCTACAAACTTTTAGAACAAGATTTGTTCTTATCAATTATCTTAGTTTTGATGATAACAATAATATGAATTTTGCTTAA 2061 0.3658 MAGLMVAGAFLTPVIQVIVERVVSGDYKDIFKKRMVNKLEINLNSINQVLDDAETKQYQNPNVRIWLDDIKHEVYEVEQLLDEIATSAQRKSKVKHFFSSLTNQFESRMKDSLDKLEHLLKQNDVVGLKEGTSARNGLEVGPESSKRVPTTSLVDESRILGRNGDKEEIIDFLLLDNGSICNHAPIISIVGLGGMGKTTLARLVYNDDKVQNSFELKAWVYVSNPFDIFGLTKEILEQFNSPTDESLEILQRQLQQTVMGKKYLLVLDDIWKANEKSWEQLLIPFNKGSSGSKMIVTTRSKDDASAMDSVKLVELEQLEESNCWSLFVTHAFQDRNVNEYPDLESIGKMIVDKCGGLPLAVKTMGNLLRKNFSKNEWEKILKTDMWRLSERDSDINPVLRLSYHNLPSNSKRCFAYCSIFPKGYEFHKNELIKMWMANGLLNSYKSNKSKEELGSESFDDLESISFFQRSLGGSFVMHDLVNDLAKSESGEFCLQVEGEKVQEISERTRHIWCSRNLKAGDGILKHIYKAKGLHSLLVNRRGDGGECFMKSNNVQCDLFSKLKYLRMLSFCGFGFSFENQELADEIGSLNSLRYLDLSWTNIKRLPDSICKLYNLERLELKGCRNLTEFPLDFYKLDHLRHLNLEGTAIKKMPKQIRKLNHLQTFRTRFVLINYLSFDDNNNMNFA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06792 686 Gene3D Ribonuclease Inhibitor 546 684 IPR032675 -
Vivi3g06792 686 PANTHER DISEASE RESISTANCE PROTEIN RP 36 667 IPR044974 GO:0006952
Vivi3g06792 686 Coils Coil 36 56 - -
Vivi3g06792 686 Gene3D - 31 122 - -
Vivi3g06792 686 FunFam Probable disease resistance protein At1g61300 143 311 - -
Vivi3g06792 686 SUPERFAMILY L domain-like 476 674 - -
Vivi3g06792 686 SMART LRR_typ_2 589 612 IPR003591 -
Vivi3g06792 686 SMART LRR_typ_2 636 659 IPR003591 -
Vivi3g06792 686 Pfam NB-ARC domain 166 383 IPR002182 GO:0043531
Vivi3g06792 686 Gene3D - 143 314 IPR027417 -
Vivi3g06792 686 Gene3D - 403 489 IPR036388 -
Vivi3g06792 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 417 IPR027417 -
Vivi3g06792 686 PRINTS Disease resistance protein signature 354 368 - -
Vivi3g06792 686 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g06792 686 PRINTS Disease resistance protein signature 610 626 - -
Vivi3g06792 686 PRINTS Disease resistance protein signature 257 271 - -
Vivi3g06792 686 Gene3D - 317 402 IPR042197 -
Vivi3g06792 686 Pfam Rx N-terminal domain 14 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06792 Vivi-Chr3 191880668 191896569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06792 592 663 WRKY Transcription Factor Family AT4G12020 35.616 9.36e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06792 - - vvo:131593166 1378.23