Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06770 ATGCAGAGGTGTGTCTATGCTATTCCAACTACTCTTTTGCGCTCCTCTGAGATGATACAGCTTGAGAATTATGTTCAAGAGTCTAAAGTTACTCCTGCAGATTTCCTTAAAAAGCTGCAAGACGCAGTATGTGATACAAAAAAAGAGATAGCAAAACACCTTGTGGATCTGGGCGTTTCTACCTTTAGCATGGCACCTGTTAAGAGGAATTATGCATTTGAACGATCTGACATACCTGCAGGTGAAAATTACATGGTGAAAATAGACTATCTGTTCAAGGATACAACACTTCCAGTAGACCTCAAAGGAGAAAGTTTTCGTTCTATTCTTCTTAAACTCGTACACCAAGAGCCTTTCATCTTTCTCGTCCCACAAACTGACTACTCTGGCAGAGAGGAGGCGAAAACATGGTTTCCCTGCAGAGGACCCTTCGACAGCCAAACCTTCAACAACTGTCGTAGAGGAGAAAAAGAGTTTTCTGCCAATTAG 489 0.4192 MQRCVYAIPTTLLRSSEMIQLENYVQESKVTPADFLKKLQDAVCDTKKEIAKHLVDLGVSTFSMAPVKRNYAFERSDIPAGENYMVKIDYLFKDTTLPVDLKGESFRSILLKLVHQEPFIFLVPQTDYSGREEAKTWFPCRGPFDSQTFNNCRRGEKEFSAN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06770 162 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 1 110 - -
Vivi3g06770 162 Gene3D - 2 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06770 Vivi-Chr3 191442050 191445268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06770 1 110 Core DNA Replication Machinery Family AT5G67100 56.757 1.39e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06770 K02320 - vvo:131657037 322.783