Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06754 ATGGCTGCAGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTCTTCAAACCTTAGTCCAGAAACTTGCCTCAACTGAGTTTCTTGATTACATCCGAAACACCAAGCTGGATGTCTCCCTCTTGAGAAAGTTACAAACAACCTTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAAGCAGATCAGCAACCCTGTTGTCAAAAATTGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAAGTTATGACTCCCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAGCAGAACTAATGAGGTGTTGAGTTTTCTTTCATCTCCTTTCAAAAACTTCTATAGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGGTCGGTAGGAATGATGATAAAGATACAATCATTAATATGCTTGTATCAGATAGTGGCACCAGAAAAAATAATAATTTAGGTGTTGTTGCAATTTGGGGTATGGGAGGTGTTGGAAAAACAACGCTAGCACAACTTGTTTACAATGATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCAGAAGACTTTGATATTCTGAGAGTAACCAAATCTCTCCTTGAATCAGTTGTTAGAAATACAACATCTAATGCTTCAAAGGTATGGAAAAGCGATAATCTTGACATTCTTCGAGTTGAGTTAAATAAAAACACGAGGAAGAAAAGATTTTTGATTGTGCTGGACGATTTGTGGAATGATAGCTACAATGACTGGAATGAGCTAGTAAGTCCCCTTGTTGATGGAAAACCTGGAAGTTCGGTGATTATTACAACGCGTCAACAAAAAGTTGCAGAAATGGCAAAGACATTTCCTATTTATAAACTAGACCCTCTGTCACATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTGGGAAATGATGAATATCACAATAGAGAAAACATAGCCCTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGGGGGATTGCCAATAGCTGCTAAAACACTGGGAGGACTTCTACGTTCAAGGGTAGACACAATGGAATGGACTAGGATTTTGAATAGTGATGTATGGAACTTACCAAATGATAACATTATGCCTGCTTTACATTTGAGTTACCAATATCTTCCATCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAGGATTATCCACTTGATAAGAAGAAATTGATTTTGTTGTGGATGGCAGAGGGTTTCCTTGATTGTTCTCAAGCAGGTAAATTACCGGAGGAAGTAGGTGATGAATGCTTTATTGGATTGTTGTCTAGATCCTTAATTCAACAGTCAAATGGTGGAGCTCGTGGAAAATATTATTTCATGCATGACCTTATCAACGACCTAGCTACTGCCGTATCTGGAAAAATTTGTGGTCGGTGTGAATGTGGTGACATCTCTGAAAAGGTTCGTCATTTATCATATATTCAAGAAGATTATGATATTTTCATGAAGTTTAAGCACTTCTACAATTTTAAATTCTTGCGAAGTTTCCTTCCTATTTCCCATCATACGTGGCCTAAATACTTATCCATTAAGGTGGTTGATGATTTGCTACCAACACTGAAAAGGTTGCGAGTGTTATCGCTATCGAAGTATGTAAACATGATCAATCTACCAAACTCAATTGGCAATTTGGTGCAATTGCGGTATCTAGATTTGTCCTTCACTGAAATCAAAAGCCTACCTGATACAATATGTAACCTTCACAATTTGCAAACCTTGATTTTATTAGGTTGCAACAGTCTCACTGAATTGCCAGTGCATATGGGAAAGTTAATCAGTTTACGTCACCTTGATATAAGTGAGACTGACATAAAAGATTTGCCTACGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAGCGACATGAAGGGTTAAGTATCAAAGAACTAAGGAAATTTCCAAACCTACAAGGAAAATTTACCATTAAAAACCTATACAATGTCATTGATGCAAAAGAGGTAGAAGCTGCCAACCTGAAGAACAAAGAGAAAATTGAGGAGTTAGAGTTGTTATGGGGAAAACAATGTGAAGATTCACTAAAAGTGAAAGATGTGCTTGAAATGTTGCAACCACCAATAAACTTAAAGAGCCTACTCATTGATTTGTATGGAGGGACAAGTTTTCCAAGTTGGTTTGGAAATTCTTTGTTTTCTAACATGGTGTCCCTTAACATCCATAATTGTGAATATTGCTTGACACTTCCACCGCTAGGGCAACTACGTTATCTCAAGGAGCTGAGTATATCTAATTTGTTGTTATTGGAGAGAATTGGACCAGAGTTCTATTGTATTCAAGAAGAATGTTCCAATTCTAGCTTCCTACCATTTCCGTCCCTTGAGCATATGAAATTTCACTGCATGCCAAATTGGAAATATTGGCTTCCTTTTGAAGGCATAAATTGTGCTTTTCCTCGACTTCGAACAATGGAGTTCCATTATTGTCCTGAACTAAAGGGACATTTACCTAGCAAGCTTCCTTGCATGGAAGAAATTAAAATAAGAGATTGTTATAATCTATTGGAAACATCACATACTTTGAATTGGCTATCGTCAATCAAAAAAGTAAACATTGAAGAAGATTTAGATTCTGAAGTGTATGCTCAAAGCACTCAATGGTTAATGCTTGAGACTGAATCTCTGTTGCAACATGCAACTTTTGAAAGTTACCCAATGTCTATGCCTAAAATGATTATGAGTAGCGTTTGTCTTACTCACTTGGAACTCTATCGTATCCCGTCTCTTACTACATTTCCTACAAATGGTCTTCCCACTTCATTGCAGTCACTTCGTATTGAAGGGTGTAGGAAGTTATCCTTAATGCCTCCCGAAACTTGGAGAAATTACACATCCATGACAAGTCTAGATATATGTGAGAGTTGTGATGCGCTTACGTCCTTTCCACTTAACGGTTTCCCTGCACTCCAAACACTTTCCATTAGTATATGTAGAGGTTTGAATTCCATTTTCAATTTAGAAAGTTTACCTTGGCCGTCAAGCCTCCGGTCACTTACAATCATCTCCCGTAGAGCAATTGAAGTCAATCTTCGGATGTACACACTCGCTGTTCTTGAACATTTGTATCTGAGTTGTGGAGAGTTGTCATTTCGTGAAGGAGTTTGTCTACCTCCCAAATTACGATCAATTTATATTTATTTTGCAAGAACAATGCCGCATGTAAATGAATGGGGTCTCCAAGACCTAACCGCTCTTTCAAGACTTAGAATTCGAGAAAGGAGTGAAATGGATAACACCTTGATGGTCGATTCGTTGCTCCCCATCTCCCTTGTGTCTCTCAGTGTCAGTGGTAATATGTCCTTTGAAAGAAATGGGCTTCGACACCTCTCCTCTCTCGAAGATCTCCGATTTGATCGCTGTCTATATTTCAAGTCATTGCCAGAAAACTGCTTTCCTTCCTCGCTGAAATCACTTGAATTTAGTTTTTGTGACAAACTTGAGTCATTTCCAGAAGACAATCTCCCTACCTCTCTTAAGCGGCTGACCACCAGAGATTGCCCTCTGTTAGAAGAAAGGTATAAAAGGAAGGAAAACTGGTCCAAAATTGCTCACATTCCTGTCATACAAATAAATAACCAACTCACAATATGA 3819 0.381 MAAAATMIGGAFLSATLQTLVQKLASTEFLDYIRNTKLDVSLLRKLQTTLLTLQAVLDDAEEKQISNPVVKNWLDDLKDVVLDAEDLVNEISYDSLRCKMENRQAGSRTNEVLSFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMVGRNDDKDTIINMLVSDSGTRKNNNLGVVAIWGMGGVGKTTLAQLVYNDEKVEQHFDFKVWVCVSEDFDILRVTKSLLESVVRNTTSNASKVWKSDNLDILRVELNKNTRKKRFLIVLDDLWNDSYNDWNELVSPLVDGKPGSSVIITTRQQKVAEMAKTFPIYKLDPLSHEDCWSILSKHALGNDEYHNRENIALEEIGRKIARKCGGLPIAAKTLGGLLRSRVDTMEWTRILNSDVWNLPNDNIMPALHLSYQYLPSHLKRCFAYCSIFPKDYPLDKKKLILLWMAEGFLDCSQAGKLPEEVGDECFIGLLSRSLIQQSNGGARGKYYFMHDLINDLATAVSGKICGRCECGDISEKVRHLSYIQEDYDIFMKFKHFYNFKFLRSFLPISHHTWPKYLSIKVVDDLLPTLKRLRVLSLSKYVNMINLPNSIGNLVQLRYLDLSFTEIKSLPDTICNLHNLQTLILLGCNSLTELPVHMGKLISLRHLDISETDIKDLPTEIGGLENLQTLTVFLVGKRHEGLSIKELRKFPNLQGKFTIKNLYNVIDAKEVEAANLKNKEKIEELELLWGKQCEDSLKVKDVLEMLQPPINLKSLLIDLYGGTSFPSWFGNSLFSNMVSLNIHNCEYCLTLPPLGQLRYLKELSISNLLLLERIGPEFYCIQEECSNSSFLPFPSLEHMKFHCMPNWKYWLPFEGINCAFPRLRTMEFHYCPELKGHLPSKLPCMEEIKIRDCYNLLETSHTLNWLSSIKKVNIEEDLDSEVYAQSTQWLMLETESLLQHATFESYPMSMPKMIMSSVCLTHLELYRIPSLTTFPTNGLPTSLQSLRIEGCRKLSLMPPETWRNYTSMTSLDICESCDALTSFPLNGFPALQTLSISICRGLNSIFNLESLPWPSSLRSLTIISRRAIEVNLRMYTLAVLEHLYLSCGELSFREGVCLPPKLRSIYIYFARTMPHVNEWGLQDLTALSRLRIRERSEMDNTLMVDSLLPISLVSLSVSGNMSFERNGLRHLSSLEDLRFDRCLYFKSLPENCFPSSLKSLEFSFCDKLESFPEDNLPTSLKRLTTRDCPLLEERYKRKENWSKIAHIPVIQINNQLTI 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06754 1272 SMART LRR_typ_2 655 678 IPR003591 -
Vivi3g06754 1272 SMART LRR_typ_2 608 631 IPR003591 -
Vivi3g06754 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 440 IPR027417 -
Vivi3g06754 1272 Gene3D Ribonuclease Inhibitor 963 1270 IPR032675 -
Vivi3g06754 1272 FunFam Probable disease resistance protein At1g63360 426 514 - -
Vivi3g06754 1272 Pfam NB-ARC domain 179 407 IPR002182 GO:0043531
Vivi3g06754 1272 PRINTS Disease resistance protein signature 280 294 - -
Vivi3g06754 1272 PRINTS Disease resistance protein signature 200 215 - -
Vivi3g06754 1272 PRINTS Disease resistance protein signature 379 393 - -
Vivi3g06754 1272 PRINTS Disease resistance protein signature 629 645 - -
Vivi3g06754 1272 PANTHER DISEASE RESISTANCE PROTEIN RP 43 907 IPR044974 GO:0006952
Vivi3g06754 1272 Gene3D - 340 424 IPR042197 -
Vivi3g06754 1272 FunFam Probable disease resistance protein At1g61300 155 332 - -
Vivi3g06754 1272 Gene3D - 162 333 IPR027417 -
Vivi3g06754 1272 MobiDBLite consensus disorder prediction 152 171 - -
Vivi3g06754 1272 SUPERFAMILY L domain-like 970 1247 - -
Vivi3g06754 1272 Coils Coil 43 63 - -
Vivi3g06754 1272 SUPERFAMILY L domain-like 504 929 - -
Vivi3g06754 1272 Gene3D - 16 133 - -
Vivi3g06754 1272 Gene3D - 425 514 IPR036388 -
Vivi3g06754 1272 Gene3D Ribonuclease Inhibitor 569 951 IPR032675 -
Vivi3g06754 1272 Pfam Rx N-terminal domain 12 106 IPR041118 -
Vivi3g06754 1272 Coils Coil 713 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06754 Vivi-Chr3 191023745 191028616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06754 201 515 WRKY Transcription Factor Family AT5G45050 26.300 2.89e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06754 - - tpra:123915821 1580.46