Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06752 ATGCCAACTCTCATCCAAACTTGGAGATGGTTGGTGCGGCCTAAAGTGTGGAGATTTGTAGGTTTTGCCTCAGCTGTTGTTGGACTTGTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAAATGGAATCCCTTGAAGATTGTTCTTTACAGCGTATTCGGCCTCATCATCAGCCTCATGATTTTCTGTGCAGAGTTACTACCGCGCTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTTCGGCACTGGCTTTCACATCTGCCTATTCCTTTTTCTTCGACAAAGTGGTGAAAGGGACACCAGATCTATATAGCCTCTTTTCATGCGCTGCCTTTGCTGTCATGTCTCTCAGCCTGTCGACGCAAACTCAGTTTGGATTTGAAATTGATCTTCTCTACTTCTTCCTCGGATGTCTAATTGTGCAACTCATGAAGATCAAATGGCAGCTATTCGTTGTTGGAGCAGCTTTCAGCTATGGTCTTATTATTACCCGTACTTCATTTTCTTCCATAGACGATGGAGAAAATAATCAGTACCCCGACCTCCATGATATTTTTGTGGTGACTCCAGGACTACAACTCACCAGTTCTAATATTGCTAATGCTAGCAATAACAATGGCATCAATTCACCACAGTTGGTGATCATCACTGATATTAGCAGTATGATGGAACAACTCAGGAAATTTGTGACTGCGCTTCAGCATGAAAATTCTAATTTCATTCAAATGCTTTTGGAGCATGTTAAAAATTATGTGGTGGCCGATCCTAACTACTTGATGGATGCACTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGGTGAGCGCTGGGTTTGAGAAGGATTTTTTCGATGTGTACATCAATTGCCGTAGGGAATGCTTAAACCAATGCCTAATGCATATATTTTTCGGGTTGCATAATTTCAGTGTCAAGGATGTCCATAGTATGCCGTGGAAAAACCTCGAAGCTGAGATTGAGAAATGGATTAAAGCTTTCAATGTCACTCTCAAGATACTCTTACCTGGCGAGAGACGACTCTGCAGTCGCATCTTATCCTCAACCACAGCTGATTTGTCCTTCGTGGAGATTTCTAGGGGATCCACCACTCAGCTATTGAATTTCGCCAACTCCATTGCCAATGGAAGCCGTTCTCCAGAGCGTTTGTTTAAAATGAGTGAGGTGTTTGAAACATTGCGTGATCTAATTCCAGACTTTGATTTGTTATTTTGTGAAGAGTACAGTGTGTCTCTAAGAAATGAAGCAATTACGATATGGGAGAGATTGGGGGAAGCAGTCAGAGAGATTTTCATGGAGTTGGAGGATCTAGTTGACAGTTCCTCAACGTATGGGCAGATGCGTAGGATTATGGATGCTTTGGAGAGCAGTTTGAATGAAAAGTTCAAATTCCAGTAG 1440 0.4236 MPTLIQTWRWLVRPKVWRFVGFASAVVGLVCYALSSSFNYLFGKWNPLKIVLYSVFGLIISLMIFCAELLPRSTSLRFKAHTAFSALAFTSAYSFFFDKVVKGTPDLYSLFSCAAFAVMSLSLSTQTQFGFEIDLLYFFLGCLIVQLMKIKWQLFVVGAAFSYGLIITRTSFSSIDDGENNQYPDLHDIFVVTPGLQLTSSNIANASNNNGINSPQLVIITDISSMMEQLRKFVTALQHENSNFIQMLLEHVKNYVVADPNYLMDALKPETIKGLEETAKVMVSAGFEKDFFDVYINCRRECLNQCLMHIFFGLHNFSVKDVHSMPWKNLEAEIEKWIKAFNVTLKILLPGERRLCSRILSSTTADLSFVEISRGSTTQLLNFANSIANGSRSPERLFKMSEVFETLRDLIPDFDLLFCEEYSVSLRNEAITIWERLGEAVREIFMELEDLVDSSSTYGQMRRIMDALESSLNEKFKFQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06752 479 Pfam Exo70 exocyst complex subunit 336 457 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi3g06752 479 Gene3D Exocyst complex component Exo70 203 467 - -
Vivi3g06752 479 PANTHER EXOCYST COMPLEX PROTEIN EXO70 262 455 IPR004140 GO:0000145|GO:0006887
Vivi3g06752 479 SUPERFAMILY Cullin repeat-like 224 477 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06752 Vivi-Chr3 190943156 190945229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06752 257 452 EXO70 exocyst subunit family AT5G58430 55.556 7.24e-67 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06752 - - vvo:131593155 940.258