Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06746 ATGGGTCAAGAGCATCGAGGAACCATTGCAAACATTGCTGATTTTGATATCACGAGATTTAGGACCCGTGCTGGACCGATGAATGCTCCTGACCCTTTGATTGTGGACTACGTTAAACGTGCGGGATTTGGTGAGACATATAGTTGGGGTTCGGCTGTGTTAGCATACCTCTATAGTTCCTTGTGCAAATGTGCAAAAAAGAATAGTTGTACATTTAGTGGATGCGCATTCTGGCTACAAGCATGGGCATGGTGGAGAATGCCGGTATTGGCCCCTGCAAATCCAAACAGTTTCGCCTTCCCTTACGCTTCAAGGTTTAATGCAATCGGCTGTCTTCAACAAAACTGTAGAGGTTCTATTAGGATAACGAATTCGTCTCGAGCTGAACGTGTTTCAGAATGTTTTATCAAGCCACTTTTCCCCGTCCAAAATTCTAACCATATCTGTAACTTGACACCTTGGGATATTGCCATGTTATCTATGCATTACATTCAAAAGGGTTTATTATTCAAAAAACCATCACCTCTAAATAATCAACAAGATTTCATCAATAATTTCTTGGACAATCTCAAACAATCCATTTCTATAGATTTCTTCCATTTCTACCCACTATCTGGTCACCTTGTCACCCAAATAACTCAAAACCCTCCATCATATTCTGTTCTGGTCGATTGCAGCGGTGACAATAATAATCCTGGAGCTAGATTCATCTATGCAAATTTGGATTCCACCATACATGATATCCTCTCTCCAATTGATACTCCATCGGTCGTAAACTCGTTGTTTGATCTTGATAGAGCTATCAATCACGATGGTCACACCATGCCGTTGTTATCCATTCAAGTCACTGAATTATTAGATGGTGTTTTCAAAGGTTGCTCCATGAACCACTCTCTTGGTGATGGAACTTCTTTTTGGAATTTCTTTAATACATGGTCTGAAATATTTCAAGCTCAAGGCCAAGGCTATGATCATGAAAATGTTCCCATTTCACGCCAACCCTTTCACCATCATTGGTTTCCCGAAGGTTATGGTCCACTAATCAATCTTCCATTCAAACATCACGACGAGTTTGCAACCAGATTTGAAGCACCCAATCTTAGAGAGAGATTATTCCACTTTACAACAGAGTCTATTACAAAACTGAAAGCAAAGGCTAATAGGGAGTGTAACACAAATACCAGAATCAAGAGTATTTCTGGTAGCATGTTTAGTTTCTTTGTTTGTGGATCCTCTTTTATTTTATTTTCCAGTAGTTAG 1260 0.3976 MGQEHRGTIANIADFDITRFRTRAGPMNAPDPLIVDYVKRAGFGETYSWGSAVLAYLYSSLCKCAKKNSCTFSGCAFWLQAWAWWRMPVLAPANPNSFAFPYASRFNAIGCLQQNCRGSIRITNSSRAERVSECFIKPLFPVQNSNHICNLTPWDIAMLSMHYIQKGLLFKKPSPLNNQQDFINNFLDNLKQSISIDFFHFYPLSGHLVTQITQNPPSYSVLVDCSGDNNNPGARFIYANLDSTIHDILSPIDTPSVVNSLFDLDRAINHDGHTMPLLSIQVTELLDGVFKGCSMNHSLGDGTSFWNFFNTWSEIFQAQGQGYDHENVPISRQPFHHHWFPEGYGPLINLPFKHHDEFATRFEAPNLRERLFHFTTESITKLKAKANRECNTNTRIKSISGSMFSFFVCGSSFILFSSS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06746 419 Pfam Transferase family 135 401 - -
Vivi3g06746 419 Gene3D - 130 345 IPR023213 -
Vivi3g06746 419 Pfam Plant mobile domain 44 106 IPR019557 -
Vivi3g06746 419 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 131 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06746 Vivi-Chr3 190804769 190812409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06746 184 392 Monolignol Biosynthesis Gene Families AT5G48930 26.457 1.60e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06746 - - vvo:131659593 884.789