Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06745 ATGCTCACTCTTCAGGTTGTTCTGGATGATGCAGAAGAGAAGCAGATCAGCACTCCTGCTGTCAAAAAATGGTTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAAGTTACGACTCCCTTCGATGCAAGATGGAGAATAGACAAGCTGGAAGAAGAACTAATCAGGTGTTGAATTTCCTTTCATCTCCTTTCAAAAACTTCTATCGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAAATACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCACGAAGACCACCTTCAAGTTCAAGGGTTAATGAATCTGTCATAGTCGGTAGGGAAGTTGATAAAGAATCAATCATCAATATGCTTGTATCAAATTGTGGCACCAGCAAAAACAATAGTTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTGTCGGAAAAACGACTCTTGCACAACTGGTTTACAATAATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGCGTATCAGAGGATTTCGATGTTGTGAGAATAACCAAGAGCCTCCTTGAATCTGTTATTAGAAATACAACATCTGCTTCTTCAAAGGTATGGGAAAGCGATAATCTTGATATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGTTTGTGCTGGATGATTTGTGGAATGGTAGTTACAATGATTGGGATGAGCTAGTAAGTCCCCTTGTGGATGGAAAACCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAATGTTGCAGAGATGGTAAAGACATTTCCTATTTATAAATTAGACCATCTGTCAAATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTCGGAAGTGATGAATATCACGCCGGAAAAAACATAACATTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGACGGATTGCCAATAGCCGCGAAAACACTAGGAGGACTTCTACGTTCAAGAGTACACACAACCGAATGGACTGCAATTTTGAATAGCGAAGTATGGAACTTACCGAATGATAACATTATGCCGGCTTTGCGTTTAAGTTACCAATCTCTCCCGTCTCATTTGAAACGATGTTTTGCGTATTGTTCAATTTTTCCAAAGGATCATCCACTTGATAGGAAGAAATTGGTTCGGTTGTGGATGGCCGAAGGCTTCCTTGATTATTCTCATGTGGGAAAATTGGCGGAGGAAGTAGGTGATGACTGCTTTGCAGAATTGTTGTCTAGATCCTTAATTCAACGATTAAATGATGGTGCTCGTGGAAAATTGTTTGTCATGCATGACCTTATCAACGACTTAGCTACATCCGTATCTGGAAAAATTTGTAGTAGGTCTGAATGTGGTGACATTCTTGAAAAGGTTCGTCATTTATCATATAATCAAAAAGAGTATGATATTTTCATGAATTTCAAGCACTTCTACAATTTTAAACGCTTGCGAAGCTTCCTACCCATTAATTTTGGGAGGTCATACAATTCGTTATCCATCACGGTGGTTGATGATCTGCTACCACTATTCAAAAGGTTGCGCATCTTGTCGCTATCACAATATAGAAACTTCACCAAGCTATCAGATTCAATTGGTAATTTGGTGCAGTTGCGGTATCTAGATCTTTCCCAAACTGCAATCAAAAGCTTTCCTGATAGAATATGTAACCTCTACAATTTGCAAACTTTGAATTTATTAGGTTGCTACAGTCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTCACATAAAAGAGTTGCCCATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAGCGACATGAAGGATTATCTATCAAAGAGCTAAGGAAATTTCCAAACCTACAAGGAAAATTTACCATCAAAAACCTATACAATGTCTTTGATGCAAAAGAGGCAGAAGATGCCAACCTGAAAAACAAAGAGAAAATTGAGGTGTTAGAGTTGAAATGGGGTAAACAGTGTGAAGATTCACTAAAAGTTAAAGTTGTGCTCGAAATGTTGCAACCACCAATAAATTTGAAGAGCCTAGTCACTGATTTGTATGGAGGGACAAGTTTTCCGAATTGGTTGGGAAATTCTTCGTTTTCTAACATGGTGTCCATTGGCATTTATAATTGTGAATATTGCATGGCACTTCCACCACTAGGCCAACTACCTTCTCTCAAGAAGCTGAGTATATCGAATTTGTTGTTATTGGAGACAATTGGTCTAGAGTTCTATTGTGTTGCGGAAGGAGAATCTTCCAATTCTACCTTCCAACCATTTCCTTCCCTTGAGCATATGGAATTTCACAGCATGCCAAATTGGAAGGATTGGATTTCCTTTGAAGGCATAAATTTTGCATTTCCACGACTTAGAACTATGAAGTTACTTGATTGTCCTGAACTAAGGGGAGATTTACCTGGCCACCTTTCTTGCATGGAAGAAATTGAATTAAGAGGTTGTTATAACCTATTGGAAAATTCCCATACTTTGAACTGGCTTTCGGCAATCAAAAAAGTCAAAATTGAAGAAGATTAA 2652 0.3782 MLTLQVVLDDAEEKQISTPAVKKWLDDLKDVVLDAEDLVNEISYDSLRCKMENRQAGRRTNQVLNFLSSPFKNFYRDINSQLKIMCETLEPFAQHKNTLGLQTKSARVSRRPPSSSRVNESVIVGREVDKESIINMLVSNCGTSKNNSLGVVAILGMGGVGKTTLAQLVYNNEKVEQHFDFKVWVCVSEDFDVVRITKSLLESVIRNTTSASSKVWESDNLDILRVELNKNTRKKRFLFVLDDLWNGSYNDWDELVSPLVDGKPGSSVIITTRQQNVAEMVKTFPIYKLDHLSNEDCWSILSKHAFGSDEYHAGKNITFEEIGRKIARKCDGLPIAAKTLGGLLRSRVHTTEWTAILNSEVWNLPNDNIMPALRLSYQSLPSHLKRCFAYCSIFPKDHPLDRKKLVRLWMAEGFLDYSHVGKLAEEVGDDCFAELLSRSLIQRLNDGARGKLFVMHDLINDLATSVSGKICSRSECGDILEKVRHLSYNQKEYDIFMNFKHFYNFKRLRSFLPINFGRSYNSLSITVVDDLLPLFKRLRILSLSQYRNFTKLSDSIGNLVQLRYLDLSQTAIKSFPDRICNLYNLQTLNLLGCYSLTELPVHMGNLISLRHLDISGTHIKELPMEIGGLENLQTLTVFLVGKRHEGLSIKELRKFPNLQGKFTIKNLYNVFDAKEAEDANLKNKEKIEVLELKWGKQCEDSLKVKVVLEMLQPPINLKSLVTDLYGGTSFPNWLGNSSFSNMVSIGIYNCEYCMALPPLGQLPSLKKLSISNLLLLETIGLEFYCVAEGESSNSTFQPFPSLEHMEFHSMPNWKDWISFEGINFAFPRLRTMKLLDCPELRGDLPGHLSCMEEIELRGCYNLLENSHTLNWLSAIKKVKIEED 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06745 883 FunFam Probable disease resistance protein At1g61300 105 283 - -
Vivi3g06745 883 FunFam Probable disease resistance protein At1g63360 377 465 - -
Vivi3g06745 883 Pfam NB-ARC domain 129 358 IPR002182 GO:0043531
Vivi3g06745 883 Pfam Rx N-terminal domain 3 57 IPR041118 -
Vivi3g06745 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 391 IPR027417 -
Vivi3g06745 883 Coils Coil 673 693 - -
Vivi3g06745 883 Gene3D - 110 284 IPR027417 -
Vivi3g06745 883 Gene3D Ribonuclease Inhibitor 494 882 IPR032675 -
Vivi3g06745 883 PRINTS Disease resistance protein signature 231 245 - -
Vivi3g06745 883 PRINTS Disease resistance protein signature 151 166 - -
Vivi3g06745 883 PRINTS Disease resistance protein signature 580 596 - -
Vivi3g06745 883 PRINTS Disease resistance protein signature 330 344 - -
Vivi3g06745 883 SUPERFAMILY L domain-like 454 876 - -
Vivi3g06745 883 Gene3D - 382 465 IPR036388 -
Vivi3g06745 883 PANTHER DISEASE RESISTANCE PROTEIN RP 24 834 IPR044974 GO:0006952
Vivi3g06745 883 Gene3D - 291 381 IPR042197 -
Vivi3g06745 883 SMART LRR_typ_2 559 582 IPR003591 -
Vivi3g06745 883 SMART LRR_typ_2 606 629 IPR003591 -
Vivi3g06745 883 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06745 Vivi-Chr3 190792538 190795424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06745 152 649 WRKY Transcription Factor Family AT5G45050 24.150 8.73e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06745 - - vvo:131659595 1342.02