Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06735 ATGGCGGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTCTTCAAACCTTAGTTGAGAAACTTGCTTCAACAGAGTTTCTTGATTATATCAGAAACACCAAGTTGGATGTCTCCCTCTTGAGAAAGTTACAAACAACCTTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAAGTTACGACTCCCTTCGCTGCAAGATGGAGAATACTAAAGCTGGAAACAGAACTAATAAGGTGTGGAACTTTCTTTCATCTCCTTTCAAAAACTTCTATAGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACCCTTGAACCTTTTGCACAACATAAAGACACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGAGTTAATGAATCTGTCATGGTCGGTAGGAATGAAGATAAAGATACAATCATCAAGATGCTTGTATCAGACTCAGACTGTGGCACCAGCAAAAACAATAATTTAGGTGTTGTTGCAATTTTGGGTATGGGCGGTGTCGGAAAAACAACCCTTGCACAACTGGTCTACAATAATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCAGAGGACTTCGATGTTGTGAGAGTAACCAAGTCTCTCCTTGAATCTGTTGTTAGAAATACAACATTTGCTGCGTCAAAGGTATGGGAAAGCGATAACCTTGATATTCTTCGAGTTGAATTAAATAAAATCACGAGGAAGAAGAGATTTTTGTTTGTGCTGGACGATTTGTGGAATGATAGTTACAATGACTGGGATGAGCTAGTAAGTCCCCTTGTTGATGGAAATCCTGGAAGTTCAGTGATTATAACTACGCGTCAACAAAAAGTTGCAGAGATGGCAAAGACATTTCCTATTTATAAATTAGACCCTCTGTCACATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTGGGAAGTGATGAATATCATGCTAGGAAAAACACAGCCCTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCTGCTAAAACACTAGGAGGACTTCTACGTTCAAGAGTAGACACAACGGAGTGGACTGAGATTTTGAACAGTGATGTATGGAATTTACCGAATGATAATATTATACCTGCGTTGCATTTGAGTTACCGTTATCTTCCGTCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAAGATTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGGAGAGGGCTTCCTTGATTATTCTCACGAGGGTAAATTGCTAGAGGAAGTAGGTGATGGTTGCTTTGCTGAATTATTGTCTAGGTCCTTAATTCAACAATCAAATGATGGTGCTCGTGGAACATTGTTTGTCATGCATGACCTTATCAACGACTTAGCTACATCCGTATCTGGAAAAATTTGTAGTAGGCCTGAATGTGGTGACATTCCTGAAAAGGTTCGACATTTATCATATAATCAAGAAGCGTATGATATTTTCATGAATTTCAAGCATTTCTACAATTTAAAATGCTTGCGAAGCTTCCTACCCATTTCCAGTAATTGGTTTAGAGCTACCTTGTCCATTAAGGTGGTTGATGATTTGTTGCCAACATTCAAAAGGTTGCGGGTGTTATCGCTTTCAAAGTATGTAAACATCACCAAGCTACCAGATTCAATTTGTAATTTGGTGCAATTGCGATATCTAGATTTGTCCTTCACTAAAATCAAAAGCTTGCCTGATACAGTATGTAACCTTTACAATTTGCAAACTTTGAATTTATTGGGTTGCTACAGTCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTGCCATAAAAGAGTTGCCTATGGAAATTGGTGAACTGGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAGCGACGTGAAGGGTTAAGTATCAAAGAGCTAAGGAAATTCCCAAACCTACAAGGAAAATTTACCATAAAAAACCTTAACAATATCATTGATGCAAAAGAGGCGGAAGATGCCAACCTGAAAAACAAAGAGAAAATTGAGAAGTTAGAGCTGATATGGGGAAAACAAAGTGAAGATTCACTAAAAGTGAAAATTGTGCTCGAAATGTTGCAACCACCAATAAACTTGAAGAGCCTAGTCATTGATTTGTATGGAGGGACAAGGTTTCCGAATTGGTTGGGAAATTCTTCATTTTCTAACATGGTGTCCATTGACATTCGTAATTGTGAATACTGCATGACACTTCCACCGCTAGGCCAACTACCTTCCCTCAAGAAGCTTAGTATATCGAATTTGTTGTTATTGGAGACAATTGGCCCAGAGTTCTATTGTGTTGAGGAAGGAGAATGTTCCAGTTCTACCTTCCAACCATTTCCTTCCCTTGAGCATATGAAATTTCACAGCATGCCAAATTGGAAGGATTGGATTTCCTTTGAAGGTATAAATTTTGCATTTCCCCGACTTAGAACTATGGAGTTACATAATTGTCCTGAACTAAGAGGAGATTTGCCTGACCACCTTTCATGCATGGAAGAAATTAAAATAGGAGGTTGTTATAAGCTATTGGAAACTACCCATACTTTGAATTGGCTATCGACAATCAAAATAGTGACAATTAAAGAAGATTTTAATCATAAAGTTTTATCCACCGACTCTCCCTTTCAACATGCAGCTGCTGCTGAAAGTTACCCAATGTTTATTTCAAAAATGATGGTGAGTAGTATTTGTCTTACTCACTTGGAACTCTGGTTTATTCAATCTCTCACTGCATTTCCCACAAATGGTCTACCCACTTCATTGCAGTCACTTAGTATTCACAGTTGTAGCAAGTTATCCTTCATGCCTTTCGAAACATTTCAAAATTACACATCACTTGTGAGGCTTGATATGTGGGAATGCTGTGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGCGCTCCAAACACTTTGCATCCATCGTTGTAGGAGTATGAATTCCATTTTTATTTCAGAAAGTCCTTCACGTCGGCAGTCAACCCTCCGATCACTTCAAATCATATCAGTTGAATCACTTAAAGTCAATCTTCGGTTGGACACGCTCACCAATCTTGAACGTTTGGATCTGTGCTGTCCTGGAGAGTTGTCATTTTGTGAAGGAGTTTGTCTACCCCCCAAATTACAAACAATTGATATTTCTTTCGGAAGAACAAAGCCGCATGTAAAGGAATGGGGTCTCCAACACCTAACCGCTCTTTCAAGATTGGTAATTCGAGAAAAGGGTAAAATGGATAACATATTGAGAATTGATTCCATGCTCCCCGTCTCCCTTGTGACTCTTTATGTCGGTGGTAATATTTTCTTTGAAGGAAATGGACTTCGACACCTGTTCTCTCTCGAAAATCTCCACTTTCATCATTGTCAGCATCTTAAGTCATTGCAAGAAAACTGCCTTCCTTCCTCGCTGAAATCACTTCAATTTTCTTTCTGTAAACAACTAGAGTCATTACCAGAAGACAACCTTCCTTCCTCTCTGAAGAAACTGACCATCAGAGAATGCCCTCTGTTAGAAGAAAGGTATAAAAGGAAGGAAAACTGGTCCAAAATTGCTCACATCCCAGACATACAAATAAATCTCCAAGTCACAATATGA 3804 0.3867 MAATMIGGAFLSATLQTLVEKLASTEFLDYIRNTKLDVSLLRKLQTTLLTLQAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVNEISYDSLRCKMENTKAGNRTNKVWNFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMVGRNEDKDTIIKMLVSDSDCGTSKNNNLGVVAILGMGGVGKTTLAQLVYNNEKVEQHFDFKVWVCVSEDFDVVRVTKSLLESVVRNTTFAASKVWESDNLDILRVELNKITRKKRFLFVLDDLWNDSYNDWDELVSPLVDGNPGSSVIITTRQQKVAEMAKTFPIYKLDPLSHEDCWSILSKHALGSDEYHARKNTALEEIGRKIARKCGGLPIAAKTLGGLLRSRVDTTEWTEILNSDVWNLPNDNIIPALHLSYRYLPSHLKRCFAYCSIFPKDYPLDRKQLVLLWMGEGFLDYSHEGKLLEEVGDGCFAELLSRSLIQQSNDGARGTLFVMHDLINDLATSVSGKICSRPECGDIPEKVRHLSYNQEAYDIFMNFKHFYNLKCLRSFLPISSNWFRATLSIKVVDDLLPTFKRLRVLSLSKYVNITKLPDSICNLVQLRYLDLSFTKIKSLPDTVCNLYNLQTLNLLGCYSLTELPVHMGNLISLRHLDISGTAIKELPMEIGELENLQTLTVFLVGKRREGLSIKELRKFPNLQGKFTIKNLNNIIDAKEAEDANLKNKEKIEKLELIWGKQSEDSLKVKIVLEMLQPPINLKSLVIDLYGGTRFPNWLGNSSFSNMVSIDIRNCEYCMTLPPLGQLPSLKKLSISNLLLLETIGPEFYCVEEGECSSSTFQPFPSLEHMKFHSMPNWKDWISFEGINFAFPRLRTMELHNCPELRGDLPDHLSCMEEIKIGGCYKLLETTHTLNWLSTIKIVTIKEDFNHKVLSTDSPFQHAAAAESYPMFISKMMVSSICLTHLELWFIQSLTAFPTNGLPTSLQSLSIHSCSKLSFMPFETFQNYTSLVRLDMWECCDSLTSFPLDGFPALQTLCIHRCRSMNSIFISESPSRRQSTLRSLQIISVESLKVNLRLDTLTNLERLDLCCPGELSFCEGVCLPPKLQTIDISFGRTKPHVKEWGLQHLTALSRLVIREKGKMDNILRIDSMLPVSLVTLYVGGNIFFEGNGLRHLFSLENLHFHHCQHLKSLQENCLPSSLKSLQFSFCKQLESLPEDNLPSSLKKLTIRECPLLEERYKRKENWSKIAHIPDIQINLQVTI 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06735 1267 PANTHER DISEASE RESISTANCE PROTEIN RP 41 902 IPR044974 GO:0006952
Vivi3g06735 1267 FunFam Probable disease resistance protein At1g61300 153 332 - -
Vivi3g06735 1267 SMART LRR_typ_2 608 631 IPR003591 -
Vivi3g06735 1267 SMART LRR_typ_2 655 678 IPR003591 -
Vivi3g06735 1267 Coils Coil 41 61 - -
Vivi3g06735 1267 Gene3D - 425 514 IPR036388 -
Vivi3g06735 1267 Pfam NB-ARC domain 194 407 IPR002182 GO:0043531
Vivi3g06735 1267 Gene3D Ribonuclease Inhibitor 1097 1258 IPR032675 -
Vivi3g06735 1267 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g06735 1267 Gene3D - 340 424 IPR042197 -
Vivi3g06735 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 440 IPR027417 -
Vivi3g06735 1267 Pfam FNIP Repeat 1195 1234 IPR008615 -
Vivi3g06735 1267 Gene3D Ribonuclease Inhibitor 952 1077 IPR032675 -
Vivi3g06735 1267 Gene3D - 160 333 IPR027417 -
Vivi3g06735 1267 PRINTS Disease resistance protein signature 280 294 - -
Vivi3g06735 1267 PRINTS Disease resistance protein signature 379 393 - -
Vivi3g06735 1267 PRINTS Disease resistance protein signature 200 215 - -
Vivi3g06735 1267 PRINTS Disease resistance protein signature 629 645 - -
Vivi3g06735 1267 Gene3D - 14 131 - -
Vivi3g06735 1267 SUPERFAMILY L domain-like 965 1242 - -
Vivi3g06735 1267 FunFam Probable disease resistance protein At1g63360 426 514 - -
Vivi3g06735 1267 Gene3D Ribonuclease Inhibitor 540 937 IPR032675 -
Vivi3g06735 1267 Coils Coil 713 742 - -
Vivi3g06735 1267 SUPERFAMILY L domain-like 503 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06735 Vivi-Chr3 190651509 190656455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06735 201 672 WRKY Transcription Factor Family AT5G45050 23.640 1.92e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06735 - - tpra:123915821 1650.18