Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06733 ATGGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTCTTCAAACCTTACTTGAGAAACTTGCTTCAACTGAGTTTCTTGATTACATTCAAAACACCAAGCTGGATGTCTCCCTATTGAGAAAGTTACAAACAACCCTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATATTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAAGTTACGACTCCCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAGAAGAACTAATCAGGTGTTGAATTTCCTTTCATCTCCTTTCAAAAACTTCTATCGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCACGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATAGTCGGTAGGGAGGTTGATAAAGAATCAATCATCAATATGCTTGTATCAAATTGTGGCACCAGCAAAAACAATAATTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTGTCGGAAAAACGACTCTTGCACAACTGGTTTACAATAATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGCGTATCAGAGGATTTCGATGTTGTGAGAATAACCAAGAGCCTCCTTGAATCTGTTATTAGAAATACAACATCTGCTTCTTCAAAGGTATGGGAAAGCGATAATCTTGATATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGTTTGTGCTGGATGATTTGTGGAATGATAGTTACAATGATTGGGATGAGCTAGTAAGTCCCCTTGTTGATGGAAAACCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAAAGTTGCAGAGATGACAAAGACATTTCCTATTTATAAATTAGACCATCTGTCAAATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTCGGAAGTGATGAATATCACGCCGGAAAAAACATAGCATTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGACGGATTGCCAATAGCCGCGAAAACACTAGGAGGACTTCTACGTTCAAGAGTAGACACAACCGAATGGACTGCAATTTTGAATAGCGAAGTATGGAACTTACCGAATGATAACATTATGCCGGCTTTGCGTTTAAGTTACCAATCTCTCCCGTCTCATTTGAAACGATGTTTTGCGTATTGTTCAATTTTTCCAAAGGATCATCCACTTGATAGGAAGAAATTGGTTCGGTTGTGGATGGCCGAAGGCTTCCTTGATTATTCTCATGTGGGAAAATTGGCGGAGGAAGTAGGTGATGACTGCTTTGCAGAATTGTTGTCTAGATCCTTAATTCAACGATTAAATGATGGTGCTCGTGGAAAATTGTTTGTCATGCATGACCTTATCAACGACTTAGCTACATCCGTATCTGGAAAAATTTGTAGTAGGTCTGAATGTGGTGACATTCCTGAAAAGGTTCGTCATTTATCATATAATCAAGAAGAGTATGATGTTTTCATGAATTTCAAGCACTTCTACAATTTTAAACACTTGCGAAGCTTCCTACCCATTAATTTTGGGAGGTCATACAATTCGTTATCCATCACGGTGGTTGATGATCTGCTATCACTATTCAAAAGGTTGCGCGTCTTGTCGCTATCACAATATAGAAACTTCACCAAGCTATCAGATTCAATTGGTAATTTGGTGCAGTTGCGGTATCTAGATCTTTCCAAAACTGCAATCAAAAGCTTGCCTGATAGAATATGTAACCTCTACAATTTGCAAACTTTGAATTTATTAGGTTGCTACAGTCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTCACATAAAAGAGTTGCCCATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAGCGACATGAAGGATTATCTATCAAAGAGCTAAGGAAATTTCCAAACCTACAAGGAAAATTTACCATCAAAAACCTATACAATGTCTTTGATGCAAAAGAGGCAGAAGATGCCAACCTGAAAAACAAAGAGAAAATTGAGGTGTTAGAGTTGAAATGGGGTAAACAGTGTGAAGATTCACTAAAAGTTAAAGTTGTGCTCGAAATGTTGCAACCACCAATAAATTTGAAGAGCCTAGTCATTGATTTGTATGGAGGGACAAGTTTTCCGAATTGGTTGGGAAATTCTTCGTTTTCTAACATGGTGTCCATTGGTATTTATAATTGTGAATATTGCATGGCACTTCCACCACTAGGCCAACTACCTTCTCTCAAGAAGCTGAGTATATCGAATTTGTTGTTATTGGAGACAATGGGTCCAGAGTTCTATTGTGTTGAGGAAGTAGAATGTTCCAATTCTACCTTCCAACCATTTCCTTCCCTTGAGCATATGGAATTTCACAGCATGCCAAATTGGAAGGATTGGATTTCCTTTGAAGGCATAAATTTTGCATTTCCACGACTTAAAACTATGAAGTTACTTGATTGTCCTGAACTAAGGGGAGATTTACCTGGCCACCTTTCTTGCATGGAAGAAATTGAAATAAGAGGTTGTTATAACCTAATGGAAAATTCCCATACTTTGAATTGGCTTTCGGCAATCAAAAAAGTAAAAATTGAAGAAGATTTAAAGTGGGAAGTGTATACTCAAAGCACTCCATGGTTAATGTTTTTTTCTAAAGTGATCACGAGTAGTATTTGTCTTACTCGTTTGACACTCTGGAATATTCAATCTCTCACTGCATTTCCCACAAATGGTCTACCCGCTTCATTGCAGTCACTTGATATTGATGGGTGTAGGAAGTTATCCTTCATGCCTTTCGAAACATTTCAAAATTACACATCACTTGTGAGTCTTTATATGTGGGATAGCTGCGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGCGCTCCAATCACTTTCCATTCTAAAGTGTAGGAGTATGAATTCCACTTTTATTTCAGAAAGTCCTTCACGTCGGCAGTCAACCCTCCAATCACTTCGCATCATATCCGATCCCTCAATTGAATCATTTAAAGTCAATCTTCGGTTGGACACGCTCACCAATCTTGAACATTTGAATCTTTGCTGTCATGGAGAGTTGTCATTTTGTGAAGGAGTTTGTCTACCCTCCAAATTACAATCACTTGTGATTGAATGCAAAAGAACAAAGCCGCATGTAAAGGAATGGGGTCTCCAAGACCTAACAGCTCTTTCAAATTTGTCAATTCAAGAAAGGGGAGAAATGGATAACACCTTGACGATGGATTCGTTTCTCCCCATCTCCCTTGTGTCTCTCACTGTCAGTAATATGTCCTTTGAAGGAAATGGGCTTCCACACCTCTCCTCTCTCCAAAATCTCCACTTGCTGAGTTGTTTACATCTTAAGTCATTGCCAGAAAACCGCGTTCCTTCCTCGCTGAAATCAATTCAATTCATTAATTGTGAAAGACTAGAGTCATTACCAGAAAACAGCCTCCCTGCCTCTCTTAAGCTACTGACTATAAAAAAATGCCCTCTGCTAGAGTCATTACCAGAAGACAGCCTCCCTGCCTCTCTTAAGAAACTCACCATCAGAGATTGCCCTTTGTTAGAAGAAAGGTACAAAAGGAAGGAAAATTGGTCCAAAATTTCTCACATCCCTGTCATACGAATAAATGGCCAACTCACAATATGA 3846 0.3869 MAATMIGGAFLSATLQTLLEKLASTEFLDYIQNTKLDVSLLRKLQTTLLTLQAVLDDAEERQINNLAVKKWLDDLKDIVLDAEDLVNEISYDSLRCKMENRQAGRRTNQVLNFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVIVGREVDKESIINMLVSNCGTSKNNNLGVVAILGMGGVGKTTLAQLVYNNEKVEQHFDFKVWVCVSEDFDVVRITKSLLESVIRNTTSASSKVWESDNLDILRVELNKNTRKKRFLFVLDDLWNDSYNDWDELVSPLVDGKPGSSVIITTRQQKVAEMTKTFPIYKLDHLSNEDCWSILSKHAFGSDEYHAGKNIAFEEIGRKIARKCDGLPIAAKTLGGLLRSRVDTTEWTAILNSEVWNLPNDNIMPALRLSYQSLPSHLKRCFAYCSIFPKDHPLDRKKLVRLWMAEGFLDYSHVGKLAEEVGDDCFAELLSRSLIQRLNDGARGKLFVMHDLINDLATSVSGKICSRSECGDIPEKVRHLSYNQEEYDVFMNFKHFYNFKHLRSFLPINFGRSYNSLSITVVDDLLSLFKRLRVLSLSQYRNFTKLSDSIGNLVQLRYLDLSKTAIKSLPDRICNLYNLQTLNLLGCYSLTELPVHMGNLISLRHLDISGTHIKELPMEIGGLENLQTLTVFLVGKRHEGLSIKELRKFPNLQGKFTIKNLYNVFDAKEAEDANLKNKEKIEVLELKWGKQCEDSLKVKVVLEMLQPPINLKSLVIDLYGGTSFPNWLGNSSFSNMVSIGIYNCEYCMALPPLGQLPSLKKLSISNLLLLETMGPEFYCVEEVECSNSTFQPFPSLEHMEFHSMPNWKDWISFEGINFAFPRLKTMKLLDCPELRGDLPGHLSCMEEIEIRGCYNLMENSHTLNWLSAIKKVKIEEDLKWEVYTQSTPWLMFFSKVITSSICLTRLTLWNIQSLTAFPTNGLPASLQSLDIDGCRKLSFMPFETFQNYTSLVSLYMWDSCDSLTSFPLDGFPALQSLSILKCRSMNSTFISESPSRRQSTLQSLRIISDPSIESFKVNLRLDTLTNLEHLNLCCHGELSFCEGVCLPSKLQSLVIECKRTKPHVKEWGLQDLTALSNLSIQERGEMDNTLTMDSFLPISLVSLTVSNMSFEGNGLPHLSSLQNLHLLSCLHLKSLPENRVPSSLKSIQFINCERLESLPENSLPASLKLLTIKKCPLLESLPEDSLPASLKKLTIRDCPLLEERYKRKENWSKISHIPVIRINGQLTI 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06733 1281 Gene3D Ribonuclease Inhibitor 545 934 IPR032675 -
Vivi3g06733 1281 Gene3D Ribonuclease Inhibitor 1138 1271 IPR032675 -
Vivi3g06733 1281 Coils Coil 41 61 - -
Vivi3g06733 1281 Gene3D - 429 512 IPR036388 -
Vivi3g06733 1281 PANTHER DISEASE RESISTANCE PROTEIN RP 41 906 IPR044974 GO:0006952
Vivi3g06733 1281 Pfam Rx N-terminal domain 10 104 IPR041118 -
Vivi3g06733 1281 Pfam NB-ARC domain 176 405 IPR002182 GO:0043531
Vivi3g06733 1281 FunFam Probable disease resistance protein At1g61300 153 330 - -
Vivi3g06733 1281 Coils Coil 720 740 - -
Vivi3g06733 1281 Gene3D - 14 131 - -
Vivi3g06733 1281 SMART LRR_typ_2 653 676 IPR003591 -
Vivi3g06733 1281 SMART LRR_typ_2 606 629 IPR003591 -
Vivi3g06733 1281 FunFam Probable disease resistance protein At1g63360 424 512 - -
Vivi3g06733 1281 Gene3D - 160 331 IPR027417 -
Vivi3g06733 1281 Gene3D - 338 428 IPR042197 -
Vivi3g06733 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 438 IPR027417 -
Vivi3g06733 1281 Gene3D Ribonuclease Inhibitor 935 1137 IPR032675 -
Vivi3g06733 1281 PRINTS Disease resistance protein signature 377 391 - -
Vivi3g06733 1281 PRINTS Disease resistance protein signature 278 292 - -
Vivi3g06733 1281 PRINTS Disease resistance protein signature 198 213 - -
Vivi3g06733 1281 PRINTS Disease resistance protein signature 627 643 - -
Vivi3g06733 1281 SUPERFAMILY L domain-like 955 1256 - -
Vivi3g06733 1281 SUPERFAMILY L domain-like 501 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06733 Vivi-Chr3 190638810 190643632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06733 195 876 WRKY Transcription Factor Family AT5G45050 22.581 1.75e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06733 - - tpra:123915821 1606.27