Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06732 ATGGATGGTCTACCCACGTCACTGCAGTCAATTAGTATTCATTATTGCGCGAAGCTAGCATTCATGCCTCCTGAAACATGGAGCAATTACACGTCGCTTGTGAGTTTGACAATATTGAGTAGCTGTGATGCACTCACATCCTTCCAACTTGATGGTTTCCCTGCGCTCCAAATGCTTCACATTGGTTATTGTTCGAGTCTAAATTCGATTTCTGTTTCAGAAATTCCATGTCATCCAACAAGACTCCAATCACTTGAAATCAGATCGCACGATTCAATTGGATTGTTTAAAGTCAAGCTTAAGATGGACATGCTCACTGCTCTTGAACATTTGTTACAAACAACCCTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATATTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAAGTTACGACTCCCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAGAAGAACTAATCAGGTGTTGAATTTTCTTTCATCTCCTTTCAAAAACTTCTATCGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGCGCTAGAGTTTCACGAAGACCACCTTCAAGTTCAAGGGTTAATGAATCTGTCATAGTCGGTAGGGAGGTTGATAAAGAATCAATCATCAATATGCTTGTATCAAATTGTGGCACCAGCAAAAACAATAATTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTGTCGGAAAAACGACTCTTGCACAACTGGTTTACAATAATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGCGTATCAGAAGATTTCGATGTTGTGAGAATAACCAAGAGCCTCCTTGAATCTGTTATTAGAAATACAACATCTGCATCTTCAAAGGTATGGGAAAGCGATAATCTTGATATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGTTTGTGCTGGATGATTTGTGGAATGATAGTTACAATGATTGGGATGAGCTAGTAAGTCCCCTTGTTGATGGAAAACCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAATGTTGCAGAGATGGTAAAGACATTTCCTATTTATAAATTAGACCATCTGTCAAATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTCGGAAGTGATGAATATCACGCCGGAAAAAACATAGCATTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGACGGATTGCCAATAGCCGCGAAAACACTAGGAGGACTTCTACGTTCAAGAGTACACACAACCGAATGGACTCCAATTTTGAATAGCGAAGTATGGAACTTACCGAATGATAACATTATGCCGGCTTTGCGTTTAAGTTACCAATCTCTCCCGTCTCCTTTGAAACGATGTTTTGCGTATTGTTCAATTTTTCCAAAGGATCATCCACTTGATAGGAAGAAATTGGTTTGGTTGTGGATGGCCGAAGGCTTCCTTGATTATTCTCATGTGGGAAAATTGGCGGAGGAAGTAGGTGATGACTGCTTTGCAGAATTGTTGTCTAGATCCTTAATTCAACGATTAAATGATGGTGCTCGTGGAAAATTGTTTGTCATGCATGACCTTATCAACGACTTAGCTACATCCGTATCTGGAAAAATTTGTAGTAGGTCTGAATGTGGTGACATTCCTGAAAAGGTTCGTCATTTATCATATAATCAAAAAGAGTATGATATTTTCATGAATTTCAAGCACTTCTACAATTTTAAACGCTTGCGAAGCTTCCTACCCATTAATTTTCGGAGGTCATACAATTCGTTATCCATCACGGTGGTTGATGATCTGCTACCACTATTCAAAAGGTTGCGCATCTTGTCGCTATCACAATATAGAAACTTCACCAAGCTATCAGATTCAATTGGTAATTTGGTGCAGTTGCGGTATCTAGATCTTTCCAAAACTGCAATCAAAAGCTTGCCTGATAGAATATGTAACCTCTACAATTTGCAAACTTTGAATTTATTAGGTTGCTACAGTCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTCACATAAAAGAGTTGCCCATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAGCGACATGAAGGATTATCTATCAAAGAGCTAAGGAAATTTCCCAACCTACAAGGAAAATTTAGCATCAAAAACCTTTACAATGTCTTTGATGCAAAAGAGGCAGAAGATGCCAACCTGAAAAACAAAGTGAAAATTGAGGTGTTCGAGTTGAAATGGGGAAAACAAAGTGAAGATTCACTAAAAGTGAAAGTTGTGCTCGAAATGTTGCAACCACCAATAAATTTGAAGAGCCTAGTCATTGATTTGTATGGAGGGACAAGTTTTCCGAATTGGTTGGGAAATTCTTCGTTTTCTAACATGGTGTCCATTGGCATTTATAATTGTGAATATTGCATGGCACTTCCACCACTAGGCCAACTACCTTCTCTCAAGAAGCTGAGTATATCGAATTTGTTGTTATTGGAGACAATTGGTCCAGAGTTCTATTGTGTTGCGGAAGGAGAATCTTCCAATTCTACCTTCCAACCATTTCCTTCCCTTGAGCATATGGAATTTCACAGCAAGCCAAATTGGAAGGATTGGATTTTCTTTGAAGGCATAAATTTTGCATTTCCACGACTTAGAACTATGAAGTTACTTGATTGTCCTGAACTAAGGGGAGATTTACCTGGCCACCTTTCTTGCATGGAAGAAATTGAAATAAGAGGTTGTTATAACCTATTGGAAAATTCCCATACTTTGAACTGGCTTTCGGCAATCAAAAAAGTCAAAATTGAAGAAGATTTAAAGTGGGAAGTGTATACTCAAAGCACTCCATGGTTAATGTTTATTTCTAAAGTGATCATGAGTAGTATTTGTCTTACTCGTTTGACACTCTGGAATATTCAATCTCTCACTGCATTTCCCACAAATGGTCTACCCGCTTCATTGCAGTCACTTGATATTGATGGGTGTAGGAAGTTATCCTTCATGCCTTTCGAAACATTTCAAAATTGCACATCACTTGTGAGTCTTTATATGTGGGATAGCTGTGATTCACTTACATCATTTCCACTTGATGGATTCCCTGCGCTCCAATCACTTTCCATTCTAAAGTGTAGGAGTATGAATTCCATTTTTATTTCAGAAAGTCCTTCACGTCGGCAGTCAACCCTCCAATCACTTCGCATCATATCCGATCACTCAATTGAATCATTTAAAGTCAATCTTCGGTTGGACACGCTCACCAATCTTGAACATTTGAATCTTTGCTGTCATGGAGAGTTGTCATTTTGTGAAGGAGTTTGTCTACCCTCCAAATTACAATCACTTGTGATTGAATGCAAACTAACAAAGCCGCATGTAAAGGAATGGGGTCTCCAAGACCTAACAGCTCTTTCAAATTTGTCAATTCAAGAAAGGGGAGAAATGGATAACACCTTGACGATGGATTCGTTTCTCCCCATCTCCCTTGTGTCTCTCACTGTCAGTAATATGTCCTTTGAAGGAAATGGGCTTCCACACCTCTCCTCTCTCCAAAATCTCCACTTTCTGAGTTGTTTACATCTTAAGTCATTGCCAGAAAACTGCGTTCCTTCCTCGCTGAAATCACTTCAATTTATTAATTGTGAAAGACTAGAGTCATTACCAGAAAACAGCCTCCCTGCCTCTCTTAAGCTACTGACTATAAAAAAATGCCCTCTGCTAGAGTCATTGCCAGAAAACAGCCTCCCGGCCTCTCTTAAGCTACTGACTATAGGAAAATGCCCTCTGCTAGAGTCATTACCAGAAGACAGCCTCCCTACCTCTCTTAAAAAACTCACCATCAGAGATTGCCCTTTGTTAGAAGAAAGGTATAAAAGGAAGGAAAATTGGTTCAAAATTTCTCACATCCCTGTCATACGAATAAATGGCCAACTCACAATATGA 4119 0.3889 MDGLPTSLQSISIHYCAKLAFMPPETWSNYTSLVSLTILSSCDALTSFQLDGFPALQMLHIGYCSSLNSISVSEIPCHPTRLQSLEIRSHDSIGLFKVKLKMDMLTALEHLLQTTLLTLQAVLDDAEERQINNLAVKKWLDDLKDIVLDAEDLVNEISYDSLRCKMENRQAGRRTNQVLNFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSRVNESVIVGREVDKESIINMLVSNCGTSKNNNLGVVAILGMGGVGKTTLAQLVYNNEKVEQHFDFKVWVCVSEDFDVVRITKSLLESVIRNTTSASSKVWESDNLDILRVELNKNTRKKRFLFVLDDLWNDSYNDWDELVSPLVDGKPGSSVIITTRQQNVAEMVKTFPIYKLDHLSNEDCWSILSKHAFGSDEYHAGKNIAFEEIGRKIARKCDGLPIAAKTLGGLLRSRVHTTEWTPILNSEVWNLPNDNIMPALRLSYQSLPSPLKRCFAYCSIFPKDHPLDRKKLVWLWMAEGFLDYSHVGKLAEEVGDDCFAELLSRSLIQRLNDGARGKLFVMHDLINDLATSVSGKICSRSECGDIPEKVRHLSYNQKEYDIFMNFKHFYNFKRLRSFLPINFRRSYNSLSITVVDDLLPLFKRLRILSLSQYRNFTKLSDSIGNLVQLRYLDLSKTAIKSLPDRICNLYNLQTLNLLGCYSLTELPVHMGNLISLRHLDISGTHIKELPMEIGGLENLQTLTVFLVGKRHEGLSIKELRKFPNLQGKFSIKNLYNVFDAKEAEDANLKNKVKIEVFELKWGKQSEDSLKVKVVLEMLQPPINLKSLVIDLYGGTSFPNWLGNSSFSNMVSIGIYNCEYCMALPPLGQLPSLKKLSISNLLLLETIGPEFYCVAEGESSNSTFQPFPSLEHMEFHSKPNWKDWIFFEGINFAFPRLRTMKLLDCPELRGDLPGHLSCMEEIEIRGCYNLLENSHTLNWLSAIKKVKIEEDLKWEVYTQSTPWLMFISKVIMSSICLTRLTLWNIQSLTAFPTNGLPASLQSLDIDGCRKLSFMPFETFQNCTSLVSLYMWDSCDSLTSFPLDGFPALQSLSILKCRSMNSIFISESPSRRQSTLQSLRIISDHSIESFKVNLRLDTLTNLEHLNLCCHGELSFCEGVCLPSKLQSLVIECKLTKPHVKEWGLQDLTALSNLSIQERGEMDNTLTMDSFLPISLVSLTVSNMSFEGNGLPHLSSLQNLHFLSCLHLKSLPENCVPSSLKSLQFINCERLESLPENSLPASLKLLTIKKCPLLESLPENSLPASLKLLTIGKCPLLESLPEDSLPTSLKKLTIRDCPLLEERYKRKENWFKISHIPVIRINGQLTI 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06732 1372 Gene3D - 406 496 IPR042197 -
Vivi3g06732 1372 FunFam Probable disease resistance protein At1g63360 492 580 - -
Vivi3g06732 1372 SUPERFAMILY L domain-like 1020 1347 - -
Vivi3g06732 1372 Pfam Rx N-terminal domain 112 172 IPR041118 -
Vivi3g06732 1372 Pfam NB-ARC domain 244 473 IPR002182 GO:0043531
Vivi3g06732 1372 Gene3D Ribonuclease Inhibitor 794 1008 IPR032675 -
Vivi3g06732 1372 Gene3D Ribonuclease Inhibitor 1260 1355 IPR032675 -
Vivi3g06732 1372 Gene3D Ribonuclease Inhibitor 629 786 IPR032675 -
Vivi3g06732 1372 SMART LRR_typ_2 721 744 IPR003591 -
Vivi3g06732 1372 SMART LRR_typ_2 674 697 IPR003591 -
Vivi3g06732 1372 Gene3D - 225 399 IPR027417 -
Vivi3g06732 1372 PANTHER DISEASE RESISTANCE PROTEIN RP 119 974 IPR044974 GO:0006952
Vivi3g06732 1372 SUPERFAMILY RNI-like 6 92 - -
Vivi3g06732 1372 Gene3D - 102 199 - -
Vivi3g06732 1372 FunFam Probable disease resistance protein At1g61300 220 398 - -
Vivi3g06732 1372 Gene3D - 497 580 IPR036388 -
Vivi3g06732 1372 PRINTS Disease resistance protein signature 266 281 - -
Vivi3g06732 1372 PRINTS Disease resistance protein signature 346 360 - -
Vivi3g06732 1372 PRINTS Disease resistance protein signature 695 711 - -
Vivi3g06732 1372 PRINTS Disease resistance protein signature 445 459 - -
Vivi3g06732 1372 Gene3D Ribonuclease Inhibitor 1012 1212 IPR032675 -
Vivi3g06732 1372 SUPERFAMILY L domain-like 569 992 - -
Vivi3g06732 1372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 506 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06732 Vivi-Chr3 190624956 190633251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06732 263 738 WRKY Transcription Factor Family AT5G45050 22.719 4.17e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06732 - - tpra:123915821 1594.33