Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06679 ATGGTTGATCAACACCCTACAATCATGGAGAAGGTCACTGGCCAGATCCACCGCCGATCTGGTGGTGTCTCATCTGGTTATGGTGGAAGCTTCCGTCAACCTGCCATGTTCCAAAAATACTCCTACGGGAATTACTCAAATGCTGCATTGGCGCCTGCATGCAGAACAACTGTTGATTTATCAGCAGTTTCAAGCAATGCTTCTCCTATGTTTGTTGCTGCTCCAGCAGAAAAGAGCCATTTTCTTATTGACTTTCTCATGGGTGGTGTTTCAGCTGCAGTTTCCAAAACTGCTGCTGCTCCCATCGAGCGTGTTAAGCTTTTGATCCAAAACCAGGACGAGATGATCAAGACTGGCAGGCTTTCTGAGCCATACAAGGGCATTGGTGATTGTTTCAAAAGAACAACCGCCGAGGAGGGTTTGGTTGCTCTATGGAGAGGAAACACCGCCAATGTCATTCGTTATTTCCCCACTCAGGCATTGAACTTTGCATTCAAAGATTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCCGGAGGTGCTGCTGGTGCTTCATCCCTCTTGTTTGTCTACTCACTCGACTATGCCCGTACCCGTCTCGCCAATGATGCCAAGGCAGCTAAAAAGGGTGGAGAAAGACAATTCAACGGTCTTGTCGATGTCTACAAGAAGACCCTCGCAACCGATGGAGTTGCTGGACTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTCGGAATGTACGATTCCCTCAAACCAGTTCTTCTGACTGGAAAATTGCAGGATAGCTTTTTCGCCAGTTTTGGACTTGGGTGGCTCATCACCAATGGTGCCGGTCTAGCCTCATACCCAATTGACACAGTTAGGAGAAGAATGATGATGACATCAGGAGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCGTTCCAACAGATCCTCAAGAACGAGGGAGCCAAGTCGTTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTGGCTGGTGCTGGTGTGCTTGCTGGTTACGACAAGTTGCAGGTTATTGTTTTCGGCAAGAAATATGGATCTGGTGGTGCTTAA 1146 0.4773 MVDQHPTIMEKVTGQIHRRSGGVSSGYGGSFRQPAMFQKYSYGNYSNAALAPACRTTVDLSAVSSNASPMFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTTAEEGLVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06679 381 Gene3D Mitochondrial carrier domain 82 377 IPR023395 -
Vivi3g06679 381 PRINTS Adenine nucleotide translocator signature 81 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 PRINTS Adenine nucleotide translocator signature 289 305 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 PRINTS Adenine nucleotide translocator signature 158 170 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 PRINTS Adenine nucleotide translocator signature 125 146 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 PRINTS Adenine nucleotide translocator signature 184 197 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 74 380 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g06679 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 172 IPR018108 -
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 293 315 IPR002067 GO:0055085
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 249 267 IPR002067 GO:0055085
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 84 97 IPR002067 GO:0055085
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 97 111 IPR002067 GO:0055085
Vivi3g06679 381 PRINTS Mitochondrial carrier protein signature 147 167 IPR002067 GO:0055085
Vivi3g06679 381 Pfam Mitochondrial carrier protein 285 370 IPR018108 -
Vivi3g06679 381 Pfam Mitochondrial carrier protein 183 279 IPR018108 -
Vivi3g06679 381 Pfam Mitochondrial carrier protein 79 176 IPR018108 -
Vivi3g06679 381 SUPERFAMILY Mitochondrial carrier 79 366 IPR023395 -
Vivi3g06679 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 284 370 IPR018108 -
Vivi3g06679 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 276 IPR018108 -
Vivi3g06679 381 FunFam ADP,ATP carrier protein, mitochondrial 82 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06679 Vivi-Chr3 188065991 188068666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06679 4 381 Antiporters AT5G13490 80.000 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06679 K05863 - gmx:100789942 650.973