Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06672 ATGTCCACCACAACCACACCTTTCACATTGAATGTTCTTGACCATTGCAAAATCACACCCCCACTCAACACAACTCCAAAAACATCTTCCCTCCCACTAACATTCTTTGACATTCCTTGGCTTCTTTATTCTCCAAGCCAACCTCTATTTTTCTATGACTTCCCCCACTCAATTTCACATTTCACAACCACCATTGTCCCAAAACTTAAACAATCTCTTTCTCTTACACTTCAACATTACTTCCCATTTTCCGGTACATTCGTTCCCTCGCCCGGTCTAACCGATCCCCAACTCAAATCCACTCATGACAACTCAATTTCATTCGTAGTCGCTGAATCAAACAGTGACTTCGAACACTTATGCTCTTATCATGTAAGAGATGTCAACAAATTTCACTCTTTAGTCCCAAAATTGCAAGAAATCTTTTCATTTGAACACAAAGAGTTCCCTTTGTTAGCTATTCAAATCACATTATTCCCAAATTATGGCTTTTCCATTGGCCTAGCTTTTCATCATGTTATTGCTGATGGAAGAACCTTCCACAATTTCATCAAAACATGGTCTTCATATTGTTCTTCTATTTCCACCTTTGAACCCTCACCATCAATAAAGTCACCACCCTTTTACGACCGAGACGTGATCATCGACGAAAAAGACCTTCGCCAAATTTTCTTAAAAGATTTAAGAAAAAGAAATGTCATGGATACTAGTAGAGACACAAAAATGGATTTCTCAAACATGACTAGAGCTACATTCTCAATGAGTCCAAGTGAAATGGAGAAAGTAAAAAAAATTATTCTTGAATCATGCAAAGAAAAGAAAACATCTCTTCCTTTGCATTTATCTCCTTATGTGTTAACTAGTGCTTTTTTTTGGGTTTGTTTGGTTAAAACCCAACAAGAGTTTGTTAATGAAGATGTTACACACTTTGGATTCATTGCTGGTGGAATAACAAGGTTAGAGTATGAAGTACCAAAGAACTATTTTGGCAATTGTGTTGGATTTGGAAAGGTATCATTGAGAAGAAAGGATTTACTAGGAGAAGATGGAATTGTTATTGCGGCTAAAGAAATCGCAAGCACAATTAAGAAACTTGATGCATCAATTTTACGGGAAGGTGAAAAGTGGATTTTGGATTGGGAAATGTTACATGGGTCAGAGGAACATGTTCATGTTACATGGTCTCCAAAATTGAGACTTTATGACTTGAATTTTGGGTGGGGGAGGCCTAAGAAAATTGAAGAGATTTCAATTGATTTTACAAGAGGTGTTTCTTTTGTTGAGAGTAGAGATTTTGAGGGTGGAATTGAGATAGGGTTAGCTTTGCCTAAGAGTGAAATGGATGTTTTCACTTTTTTGTTTAATAAAGGACTCGAGGATCTAGCATGA 1389 0.3693 MSTTTTPFTLNVLDHCKITPPLNTTPKTSSLPLTFFDIPWLLYSPSQPLFFYDFPHSISHFTTTIVPKLKQSLSLTLQHYFPFSGTFVPSPGLTDPQLKSTHDNSISFVVAESNSDFEHLCSYHVRDVNKFHSLVPKLQEIFSFEHKEFPLLAIQITLFPNYGFSIGLAFHHVIADGRTFHNFIKTWSSYCSSISTFEPSPSIKSPPFYDRDVIIDEKDLRQIFLKDLRKRNVMDTSRDTKMDFSNMTRATFSMSPSEMEKVKKIILESCKEKKTSLPLHLSPYVLTSAFFWVCLVKTQQEFVNEDVTHFGFIAGGITRLEYEVPKNYFGNCVGFGKVSLRRKDLLGEDGIVIAAKEIASTIKKLDASILREGEKWILDWEMLHGSEEHVHVTWSPKLRLYDLNFGWGRPKKIEEISIDFTRGVSFVESRDFEGGIEIGLALPKSEMDVFTFLFNKGLEDLA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06672 462 PANTHER - 10 460 - -
Vivi3g06672 462 Gene3D - 244 461 IPR023213 -
Vivi3g06672 462 Gene3D - 8 242 IPR023213 -
Vivi3g06672 462 Pfam Transferase family 18 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06672 Vivi-Chr3 187581887 187583325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06672 49 454 Monolignol Biosynthesis Gene Families AT5G48930 25.234 4.47e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06672 - - gmx:100817166 580.867