Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06663 ATGGCTAATGATAACTCAGCAAGATTTGAAACCAATGATATTGAAAACAATGGTACTGTTTTAGATGTAAACAAAGATTCCTCCCAAGAATCTACAGACTCCTATGTTCCTTTCTTGCAAAAGTTGATAGGAGAGGTTGTGGGAACATATTTCTTGATATTTGCTGGATGTGCTTCGATTATTGTGAACAACAACCATGACAACGTTGTCACGCTTGATGGTATTGCGATTGTCTGGGGACTTACTTTGTTGGTGTTGATTTACTCTCTCGGTCATATCTTCGGTGCTCATTTCAATCCTGCTGTTACCATTGCTTTTGCTAGCACAAGGAGGTTTCTATTAATACAGGTCAACAAAACACACAAGCTTTTTACTCTATAA 381 0.378 MANDNSARFETNDIENNGTVLDVNKDSSQESTDSYVPFLQKLIGEVVGTYFLIFAGCASIIVNNNHDNVVTLDGIAIVWGLTLLVLIYSLGHIFGAHFNPAVTIAFASTRRFLLIQVNKTHKLFTL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06663 126 Gene3D Glycerol uptake facilitator protein. 1 118 IPR023271 -
Vivi3g06663 126 PANTHER AQUAPORIN NIP2-1 21 117 IPR034294 -
Vivi3g06663 126 SUPERFAMILY Aquaporin-like 36 115 IPR023271 -
Vivi3g06663 126 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g06663 126 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g06663 126 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Vivi3g06663 126 Pfam Major intrinsic protein 36 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06663 Vivi-Chr3 187122289 187122834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06663 12 117 Major Intrinsic Protein MIP AT4G19030 60.909 2.28e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06663 K09874 - gmx:100813448 147.902