Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi3g06657 | ATGGCTCAAAGAATAGAAAACGAAGAAACTGAATTCAAAGTACCTGAATCGATTTCTCTTTGCATCAACAACTGCGGCGTAATCGGTAATCCTTCAACGAACAATATGTGTCAAAATTGCTTCACCGCTTCAACCGCTACCACTTCTTCCACCGTCGGGATAACCGGAGCCGGTTTAACCGGGACCGGAATCGGACCTCAATCTTCCAGATCTGTTCGATCTCCGAAGAGATCTCTACCGGAGGAATCGTCAACGGTTGTTACGGATCGGAGTTCGTTAGATAAACCGATGGTGTCCGAGGCGAAGCGTGTTGTTAGCCGATGCTCCGGTTGCCGGAGGAAGGTAGGGTTGACCGGATTCCGATGTAGGTGCGGTGATCTTTTCTGCTCCGAGCATCGTTACTCCGATCGGCATGATTGTAGCTATGATTATAAAAGTGCTGGAAGAGAAGCTATTGCGAGGGAGAATCCGGTTATCAGAGCAGCGAAAATCGTTAAGGTTTGA | 504 | 0.4821 | MAQRIENEETEFKVPESISLCINNCGVIGNPSTNNMCQNCFTASTATTSSTVGITGAGLTGTGIGPQSSRSVRSPKRSLPEESSTVVTDRSSLDKPMVSEAKRVVSRCSGCRRKVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKSAGREAIARENPVIRAAKIVKV | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi3g06657 | 167 | Pfam | AN1-like Zinc finger | 108 | 145 | IPR000058 | GO:0008270 | |
Vivi3g06657 | 167 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 19 | 166 | - | - | |
Vivi3g06657 | 167 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 20 | 51 | - | - | |
Vivi3g06657 | 167 | SMART | AN1_Zf_4 | 108 | 145 | IPR000058 | GO:0008270 | |
Vivi3g06657 | 167 | Gene3D | - | 4 | 82 | - | - | |
Vivi3g06657 | 167 | FunFam | Zinc finger AN1-type containing 6 | 81 | 163 | - | - | |
Vivi3g06657 | 167 | SMART | A20_3 | 18 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
Vivi3g06657 | 167 | ProSiteProfiles | Zinc finger AN1-type profile. | 102 | 148 | IPR000058 | GO:0008270 | |
Vivi3g06657 | 167 | FunFam | Zinc finger A20 and AN1 domain-containing stress-associated protein 1 | 1 | 63 | - | - | |
Vivi3g06657 | 167 | MobiDBLite | consensus disorder prediction | 57 | 91 | - | - | |
Vivi3g06657 | 167 | SUPERFAMILY | AN1-like Zinc finger | 94 | 161 | IPR035896 | - | |
Vivi3g06657 | 167 | Gene3D | - | 83 | 163 | IPR035896 | - | |
Vivi3g06657 | 167 | Pfam | A20-like zinc finger | 19 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Vivi3g06657 | 167 | ProSiteProfiles | Zinc finger A20-type profile. | 15 | 49 | IPR002653 | GO:0003677|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi3g06657 | Vivi-Chr3 | 186961122 | 186962052 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi3g06657 | 8 | 167 | C2H2 Transcription Factor Family | AT3G52800 | 36.158 | 7.59e-34 | 115 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi3g06657 | - | - | pvu:PHAVU_005G036400g | 238.039 |