Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06582 ATGGCTGCAAAGCTGCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGTTGTATGACTGGAATTTTTCAACTTTTCGATCGGCATCAGATACTCACGGCGCGACAGAAGAGACTTCCTTCTGGTAATTTGCATTACAGTGATGGAAGCTTGGAAAGAGATTCTGATAGCAATCATAGTCTGCAACATCGACAAATCCCAAACGATACGAGCTTAAACAGGGATCTGAATGAAAAGCGAAGAATTTCGACAGAATCATCAAGAGCATCATTCTCGTCTTGTTCATCATCATTGTCCTCTTTGGACTTTAAGGCTGAAGTAGAGACTTCCTTTGAAACTCCTTCAAGGGACACATTTATGAACCAACCATCTATCTCTCCTCGTTTCGGACGTCACTCACTTGACCTACGTGACGTCGTGAAGGATTCAATGTATAGGGATCCTCGAGGGCCATCTTCAAAATCTACAGCCAAAGAGCAATCTTCTGGTCATGCCATGAAGCATAGGGATTCGCCGCGACCTCTTCAGCAGTCGAAATATGTTGATAGATCTTACGGAGTTGAAATAGACGAGAAGCAAAGTTTGCCTATTGATCTAAGGGAGTCGATCCGAGTCCTTTCGAAACTCCGAGAAGCACCTTGGCACTATGGAGAAAATACGAAAGAACTTCCGAGATCGTCGCATGATGTAAAAGACGGACACTGGAATTCCGTCTCGAAGGATGCTCCTTGGTTGGCTTATGACGGAAGAGAAATGAGTCGTTTATCTTTTGAATCTCGAGAGACGATCAAATCGACACCGAAGATAAAAGAGTTTCCAAGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCAATTATAACTCTGATTCGAAGCCTAACCACGGCTCGAGAAACGCTTACGGCGCCACTTCCACTTCCAATGAAAAATTCTCTAGTCCACAACAGTCTTCATCAATACAGAATCGGCTACCAAGTGTTGTCGCAAAACTAATGGGCTTGGAAGCATTACCTGATTCCTCTTTGGCCGGCGATACTCAATCAGCTTCAACTGAAACTTACTCAGCGCAAGGTAACGGTCAGATTCCAAGATCATCGAACAATGGTTTCATAAGACCACTCCGTGTTTCTAAATCTCCGAAAATCTCGTCGAAAGATCCAACTTCACCAAGGCGGAAAAATCCTGACGTCGTTATGAGACCAGTCAGTAATTCAAAGTTTCCGATTGAACCAGCACCTTGGAAGCAACATGATTCAAATAGAAATTCTCCGAAGCCAAGTTTAAAAATAACAAAAGCTCAAGCAAGAACACCGGAATCACTTCCTTCGGTTTATAGCGAGATTGAGAAGAGATTAAAGGACCTTGAATTCAAACAATCGGGAAGAGATCTTAGAGCCCTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGTCTGTTGGAGAGCCGAAACGACGAACAAGTTCCAAACGCAGGTGGAAGTCGAGGTGACTATGAACCGAAAGCTACCAATCTAAATCACAATTCGAGGTCGGGAAAGCAACAAAATCATCCGAGAAACAATTCTCTATCATCTACAATCAAGGGAAGTGACTCAGCAAGAGCTTTTGATTCTCCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGAAATCCGAGTTTTCGGCTTCTTCAGCTATTCCAATTGGTGGTTTTTCTGCTTCCCATAATAGAAACAACATATCTTCTCCTCTAAAAGATCAGTCTCCGAAGAATATTCGCAGGGACGCTTCTCCGAGTTCCACCGAAAAGAAAACAAGTATTACCAAGAATACTAGATCACCACAATCTCAATCAAGGTCTCAACAATTCCCAAGAGAAAATAACCAAAGTCCAGTGAAGAATTCAGGTTCCGTGAGTCCGAGATTGCAGCAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTATACCTACTTCACCATCCGATGCAAACAAGTCAAGAAGACAATCTGGTAAAAAGGCAGCGGAATCAGTTTCCCCGGGTGGAAAATTACGACACAAAGACAAAGTCTTCAACTCACAGCATAGCGAAGAGCAATTGAGTGAACTAAGCAATGATTCTCGAAATTTTTACCAAGGGGATGAAATTTCTCTTCCATCAGATGGCGTGACTGTCGACTCAAAATTGGATATTGAAGTCACTAGTAGTTTACGGACAAACGTAACCGATGGCAGCCAAAGTCCGTCCTTGAAAGCTATGAAGCAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACTCCAAGGTTGGATGAAGATGATACTATTCAGGATCTCGCTACTAAGGCCCTGGAACATCCAAGTCCTATCTCGGTTCTTGATGGATCTCCGTACACAGACGACGTGGCGTCGCCAGAAATGCAGATACCTAAAAATCCAAAAGGTAATGATCAAGATTCCAAAGACAATGAGGTCAAAGATCAATGGAAGCCTGATGAAGGCCTTTCATTTAACAGCACGGGATCCGGAGAGATCAATCGCAAGAAATTACAAAGCATAGATCACCTCGTTCAGAAGCTTAGACGGCTAAACTCAAACCACGACGAAGCTAGAAACGATTACATTGCTTCACTATGCGAAAACTCAAATCCAGACCACCGATACATATCTGAAATACTACTAGCCTCCGGTCTCTTACTCAGAGACCTGAGTTCCGAATTTCTTACATTTCAACTACACTCGTCGGGTCATCCTATCAACCCGGAGTTATTCCTTGTCTTGGAACAAACCAAAGCAAGTAGTCTGCTTTCAAAAGAAGAAACCACCACCTTCGAAAAATCTGCTTTCTCAAAGCAAAACACCGAGAAATTCCACCGAAAACTCATCTTTGATTCCGTGAACGAAATCCTCGGTGCCAAACTAGGCTATTCATCCGAACCATGGTTTCAACCCAACAAACTCACAAAGAAAAACCTTAGCTCTCAAAAGCTTCTCAAAGAACTATGCTTCGAGATCGAAAAGGTCCAAGCCAAGAAAACCGAAACCTGCCTAGAAGACGACGAAGAGGACGACGGTTTAAAGAGTCTGTTGAGCGAAGACGTGATTCATGGATCAGAATGCTGGGAAAATTTCAATGGCGAAATACCTGGAGTTGTGTTGGATGTTGAGAGATTGATATTCAAGGATTTGGTGAATGATATTGTGATTGGTGAAGCTGCTGGCTTGCGAGGCAAGTCATCGGTTCGGCGCAGGAAACTGTTTGGAAAGTAG 3258 0.4303 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQILTARQKRLPSGNLHYSDGSLERDSDSNHSLQHRQIPNDTSLNRDLNEKRRISTESSRASFSSCSSSLSSLDFKAEVETSFETPSRDTFMNQPSISPRFGRHSLDLRDVVKDSMYRDPRGPSSKSTAKEQSSGHAMKHRDSPRPLQQSKYVDRSYGVEIDEKQSLPIDLRESIRVLSKLREAPWHYGENTKELPRSSHDVKDGHWNSVSKDAPWLAYDGREMSRLSFESRETIKSTPKIKEFPRHSLDSKEGSWRNYNSDSKPNHGSRNAYGATSTSNEKFSSPQQSSSIQNRLPSVVAKLMGLEALPDSSLAGDTQSASTETYSAQGNGQIPRSSNNGFIRPLRVSKSPKISSKDPTSPRRKNPDVVMRPVSNSKFPIEPAPWKQHDSNRNSPKPSLKITKAQARTPESLPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRNDEQVPNAGGSRGDYEPKATNLNHNSRSGKQQNHPRNNSLSSTIKGSDSARAFDSPIVIMKPAKLVEKSEFSASSAIPIGGFSASHNRNNISSPLKDQSPKNIRRDASPSSTEKKTSITKNTRSPQSQSRSQQFPRENNQSPVKNSGSVSPRLQQKKLELEKRSRIPTSPSDANKSRRQSGKKAAESVSPGGKLRHKDKVFNSQHSEEQLSELSNDSRNFYQGDEISLPSDGVTVDSKLDIEVTSSLRTNVTDGSQSPSLKAMKQLVSETVQKKSTPRLDEDDTIQDLATKALEHPSPISVLDGSPYTDDVASPEMQIPKNPKGNDQDSKDNEVKDQWKPDEGLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSNHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLSSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEETTTFEKSAFSKQNTEKFHRKLIFDSVNEILGAKLGYSSEPWFQPNKLTKKNLSSQKLLKELCFEIEKVQAKKTETCLEDDEEDDGLKSLLSEDVIHGSECWENFNGEIPGVVLDVERLIFKDLVNDIVIGEAAGLRGKSSVRRRKLFGK 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06582 1085 Coils Coil 849 869 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 115 132 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 262 325 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 135 152 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 778 839 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 115 186 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 345 377 - -
Vivi3g06582 1085 Pfam DUF761-associated sequence motif 316 345 IPR032795 -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 568 722 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 505 535 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 568 585 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 46 99 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 286 325 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 693 711 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 599 640 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 811 827 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 344 446 - -
Vivi3g06582 1085 Pfam Domain of unknown function (DUF4378) 881 1062 IPR025486 -
Vivi3g06582 1085 PANTHER LONGIFOLIA PROTEIN 1 1083 IPR033334 GO:0051513
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 482 535 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 262 285 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 165 180 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 676 692 - -
Vivi3g06582 1085 MobiDBLite consensus disorder prediction 420 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06582 Vivi-Chr3 182930599 182935861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06582 133 1084 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.243 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06582 - - gmx:100787391 1446.41