Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06581 ATGGCTGCAAAGCTGCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGTTGTATGACTGGAATTTTTCAACTTTTCGATCGGCATCAGATACTCACGGCGCGACAGAAGAGACTTCCTTCTGGTAATTTGCATTACAGTGATGGAAGCTTGGAAAGAGATTCTGATAGCAATCATAGTCTGCAACATCGACAAATCCCAAACGATACGAGCTTAAACAGGGATCTGAATGAAAAGCGAAGAATTTCGACAGAATCATCAAGAGCATCATTCTCGTCTTGTTCATCATCATTGTCCTCTTTGGACTTTAAGGCTGAAGTAGAGACTTCCTTTGAAACTCCTTCAAGGGACACATTTATGAACCAACCATCTATCTCTCCTCGTTTCGGACGTCACTCACTTGACCTACGTGACGTCGTGAAGGATTCAATGTATAGGGATCCTCGAGGGCCATCTTCAAAATCTACAGCCAAAGAGCAATCTTCTGGTCATGCCATGAAGCATAGGGATTCGCCGCGACCTCTTCAGCAGTCGAAATATGTTGATAGATCTTACGGAGTTGAAATAGACGAGAAGCAAAGTTTGCCTATTGATCTAAGGGAGTCGATCCGAGTCCTTTCGAAACTCCGAGAAGCACCTTGGCACTATGGAGAAAATACGAAAGAACTTCCGAGATCGTCGCATGATGTAAAAGACGGACACTGGAATTCCGTCTCGAAGGATGCTCCTTGGTTGGCTTATGACGGAAGAGAAATGAGTCGTTTATCTTTTGAATCTCGAGAGACGATCAAATCGACACCGAAGATAAAAGAGTTTCCAAGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCAATTATAACTCTGATTCGAAGCCTAACCACGGCTCGAGAAACGCTTACGGCGCCACTTCCACTTCCAATGAAAAATTCTCTAGTCCACAACAGTCTTCATCAATACAGAATCGGCTACCAAGTGTTGTCGCAAAACTAATGGGCTTGGAAGCATTACCTGATTCCTCTTTGGCCGGCGATACTCAATCAGCTTCAACTGAAACTTACTCAGCGCAAGGTAACGGTCAGATTCCAAGATCATCGAACAATGGTTTCATAAGACCACTCCGTGTTTCTAAATCTCCGAAAATCTCGTCGAAAGATCCAACTTCACCAAGGCGGAAAAATCCTGACGTCGTTATGAGACCAGTCAGTAATTCAAAGTTTCCGATTGAACCAGCACCTTGGAAGCAACATGATTCAAATAGAAATTCTCCGAAGCCAAGTTTAAAAATAACAAAAGCTCAAGCAAGAACACCGGAATCACTTCCTTCGGTTTATAGCGAGATTGAGAAGAGATTAAAGGACCTTGAATTCAAACAATCGGGAAGAGATCTTAGAGCCCTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGTCTGTTGGAGAGCCGAAACGACGAACAAGTTCCAAACGCAGGTGGAAGTCGAGGTGACTATGAACCGAAAGCTACCAATCTAAATCACAATTCGAGGTCGGGAAAGCAACAAAATCATCCGAGAAACAATTCTCTATCATCTACAATCAAGGGAAGTGACTCAGCAAGAGCTTTTGATTCTCCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGAAATCCGAGTTTTCGGCTTCTTCAGCTATTCCAATTGGTGGTTTTTCTGCTTCCCATAATAGAAACAACATATCTTCTCCTCTAAAAGATCAGTCTCCGAAGAATATTCGCAGGGACGCTTCTCCGAGTTCCACCGAAAAGAAAACAAGTATTACCAAGAATACTAGATCACCACAATCTCAATCAAGGTCTCAACAATTCCCAAGAGAAAATAACCAAAGTCCAGTGAAGAATTCAGGTTCCGTGAGTCCGAGATTGCAGCAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTATACCTACTTCACCATCCGATGCAAACAAGTCAAGAAGACAATCTGGTAAAAAGGCAGCGGAATCAGTTTCCCCGGGTGGAAAATTACGACACAAAGACAAAGTCTTCAACTCACAGCATAGCGAAGAGCAATTGAGTGAACTAAGCAATGATTCTCGAAATTTTTACCAAGGGGATGAAATTTCTCTTCCATCAGATGGCGTGACTGTCGACTCAAAATTGGATATTGAAGTCACTAGTAGTTTACGGACAAACGTAACCGATGGCAGCCAAAGTCCGTCCTTGAAAGCTATGAAGCAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACTCCAAGGTTGGATGAAGATGATACTATTCAGGATCTCGCTACTAAGGCCCTGGAACATCCAAGTCCTATCTCGGTTCTTGATGGATCTCCGTACACAGACGACGTGGCGTCGCCAGAAATGCAGATACCTAAAAATCCAAAAGGATCAAACTTTGCAGCAGGTAATGATCAAGATTCCAAAGACAATGAGGTCAAAGATCAATGGAAGCCTGATGAAGGCCTTTCATTTAACAGCACGGGATCCGGAGAGATCAATCGCAAGAAATTACAAAGCATAGATCACCTCGTTCAGAAGCTTAGACGGCTAAACTCAAACCACGACGAAGCTAGAAACGATTACATTGCTTCACTATGCGAAAACTCAAATCCAGACCACCGATACATATCTGAAATACTACTAGCCTCCGGTCTCTTACTCAGAGACCTGAGTTCCGAATTTCTTACATTTCAACTACACTCGTCGGGTCATCCTATCAACCCGGAGTTATTCCTTGTCTTGGAACAAACCAAAGCAAGTAGTCTGCTTTCAAAAGAAGAAACCACCACCTTCGAAAAATCTGCTTTCTCAAAGCAAAACACCGAGAAATTCCACCGAAAACTCATCTTTGATTCCGTGAACGAAATCCTCGGTGCCAAACTAGGCTATTCATCCGAACCATGGTTTCAACCCAACAAACTCACAAAGAAAAACCTTAGCTCTCAAAAGCTTCTCAAAGAACTATGCTTCGAGATCGAAAAGGTCCAAGCCAAGAAAACCGAAACCTGCCTAGAAGACGACGAAGAGGACGACGGTTTAAAGAGTCTGTTGAGCGAAGACGTGATTCATGGATCAGAATGCTGGGAAAATTTCAATGGCGAAATACCTGGAGTTGTGTTGGATGTTGAGAGATTGATATTCAAGGATTTGGTGAATGATATTGTGATTGGTGAAGCTGCTGGCTTGCGAGGCAAGTCATCGGTTCGGCGCAGGAAACTGTTTGGAAAGTAG 3276 0.4304 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQILTARQKRLPSGNLHYSDGSLERDSDSNHSLQHRQIPNDTSLNRDLNEKRRISTESSRASFSSCSSSLSSLDFKAEVETSFETPSRDTFMNQPSISPRFGRHSLDLRDVVKDSMYRDPRGPSSKSTAKEQSSGHAMKHRDSPRPLQQSKYVDRSYGVEIDEKQSLPIDLRESIRVLSKLREAPWHYGENTKELPRSSHDVKDGHWNSVSKDAPWLAYDGREMSRLSFESRETIKSTPKIKEFPRHSLDSKEGSWRNYNSDSKPNHGSRNAYGATSTSNEKFSSPQQSSSIQNRLPSVVAKLMGLEALPDSSLAGDTQSASTETYSAQGNGQIPRSSNNGFIRPLRVSKSPKISSKDPTSPRRKNPDVVMRPVSNSKFPIEPAPWKQHDSNRNSPKPSLKITKAQARTPESLPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRNDEQVPNAGGSRGDYEPKATNLNHNSRSGKQQNHPRNNSLSSTIKGSDSARAFDSPIVIMKPAKLVEKSEFSASSAIPIGGFSASHNRNNISSPLKDQSPKNIRRDASPSSTEKKTSITKNTRSPQSQSRSQQFPRENNQSPVKNSGSVSPRLQQKKLELEKRSRIPTSPSDANKSRRQSGKKAAESVSPGGKLRHKDKVFNSQHSEEQLSELSNDSRNFYQGDEISLPSDGVTVDSKLDIEVTSSLRTNVTDGSQSPSLKAMKQLVSETVQKKSTPRLDEDDTIQDLATKALEHPSPISVLDGSPYTDDVASPEMQIPKNPKGSNFAAGNDQDSKDNEVKDQWKPDEGLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSNHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLSSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEETTTFEKSAFSKQNTEKFHRKLIFDSVNEILGAKLGYSSEPWFQPNKLTKKNLSSQKLLKELCFEIEKVQAKKTETCLEDDEEDDGLKSLLSEDVIHGSECWENFNGEIPGVVLDVERLIFKDLVNDIVIGEAAGLRGKSSVRRRKLFGK 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 135 152 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 262 325 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 115 132 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 115 186 - -
Vivi3g06581 1091 PANTHER LONGIFOLIA PROTEIN 1 1089 IPR033334 GO:0051513
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 345 377 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 505 535 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 568 585 - -
Vivi3g06581 1091 Pfam Domain of unknown function (DUF4378) 887 1068 IPR025486 -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 286 325 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 46 99 - -
Vivi3g06581 1091 Pfam DUF761-associated sequence motif 316 345 IPR032795 -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 599 640 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 568 703 - -
Vivi3g06581 1091 Coils Coil 855 875 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 344 446 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 482 535 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 262 285 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 778 845 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 165 180 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 676 692 - -
Vivi3g06581 1091 MobiDBLite consensus disorder prediction 420 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06581 Vivi-Chr3 182930599 182935862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06581 133 1090 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.970 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06581 - - gmx:100787391 1442.17