Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06552 ATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTACCTTTGCACTGGAAATCCATTGCCCAAAGACATTGATCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAATTAATGATATGAAAACAAGGAAAGGACTGGCCCTTGTTGATATTGTAAGAGAAGTGACAATAGATATTAGGATCAAGGAGAGAAGGTTGAATTTTCAGGGCCCCTAA 231 0.3723 MASQQITEEAVYLCTGNPLPKDIDQISYWLLNEQYSESFKRINDMKTRKGLALVDIVREVTIDIRIKERRLNFQGP 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06552 76 Gene3D - 18 74 - -
Vivi3g06552 76 Pfam Replication factor C C-terminal domain 18 60 IPR013748 -
Vivi3g06552 76 SUPERFAMILY post-AAA+ oligomerization domain-like 18 61 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06552 Vivi-Chr3 181187989 181189376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06552 3 64 Core DNA Replication Machinery Family AT1G77470 67.742 3.16e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06552 K10756 - vvo:131656974 154.836