Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06537 ATGTCTCTATGGTTCATTGCACTCTCCACTTTCATATTATCTATCTTAATATACCGTTTTCTAAAATCCACAACAAAATCTTCTTCTTCACTGCCACTTCCACCTGGACCAAAACCATGGCCTATAATAGGTAACATGCCTCACGTAGGCTCTGCCCCACACCAATCTATTGCTGCTTTGGCTCAAATTCATGGCCCTTTGATGCACCTCAAATTAGGGTTTGTCGATGTTATCGTCGCCGCTTCCGCCTCCGTGGCTGAACAATTCTTAAAGGTTTATGATGCTAACTTTAGTAGCCGACCACCTAATGCCGCAGCTAAAAATATGGTTTATAATTATCAAGATCTTGTGTTTGCTCCTTATGGCCCAAGGTGGAGATTGCTCCGAAAGATCTCTTCCGTTCATCTCTTTTCGAACAAAGTTATGGCCGAATTTCAACATTTACGTGAGGAAGAGACAGCAAGATTGACAAGCAAATTGGCAAGCAGTTATTCTGATGCACAACCAATGCACTTGCTAGGGCTATACCTTCAAGGAGTTCAAGCAAAAATGAAAATATTACACAAGAAATTTGATGCATTCTTAACAAACATTATCGAAGAACATGAGACTTCTAATTCTAAGAGTGAGAAGCATAAAGATTTATTGACTACTTTGTTGGCACTTAGAGATGAAGGAGATGATGAAGGAAATAAACTCACAAATACTGAAATCAAAGCTTTGCTTTTGTTAGATTTTACTGCATTCTCACATTTGATAATAAGAATTAAAAGATTTATATTTTAA 786 0.3779 MSLWFIALSTFILSILIYRFLKSTTKSSSSLPLPPGPKPWPIIGNMPHVGSAPHQSIAALAQIHGPLMHLKLGFVDVIVAASASVAEQFLKVYDANFSSRPPNAAAKNMVYNYQDLVFAPYGPRWRLLRKISSVHLFSNKVMAEFQHLREEETARLTSKLASSYSDAQPMHLLGLYLQGVQAKMKILHKKFDAFLTNIIEEHETSNSKSEKHKDLLTTLLALRDEGDDEGNKLTNTEIKALLLLDFTAFSHLIIRIKRFIF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06537 261 Gene3D Cytochrome P450 175 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06537 261 PANTHER CYTOCHROME P450 93A3-LIKE 172 243 - -
Vivi3g06537 261 Gene3D Cytochrome P450 23 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06537 261 Pfam Cytochrome P450 172 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06537 261 Pfam Cytochrome P450 34 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06537 261 SUPERFAMILY Cytochrome P450 34 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06537 Vivi-Chr3 179725277 179729522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06537 1 248 Cytochrome P450 AT5G07990 46.535 1.56e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06537 K05280 - gmx:547475 295.049