Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06536 ATGTCTCTATGGCTCATAGCATTCTCCACTTTCATATTATCTATCTTGATATACCGTTTTCTGAAATCCACAACAAAATCTTCTTCTTCATCACTACCACTTCCACCAGGACCAAAACCATGGCCTATAATAGGTAACATGCCTCACTTAGGTACTGCACCACACCAATCTATTGCAGCCCTGGCTCAAATTCATGGCCCTTTGATGCACCTCAAATTAGGGTTTGTCGATGTTATCGTGGCCGCTTCCGCCTCCGTGGCTGAACAATTCTTAAAGGTTCATGATGCTAACTTTAGTAGCCGGCCACCTAATGCCGCAGCTAAGAATATGGTTTATAACTATCAAGATCTTGTGTTTGCTCCTTATGGTCCAAGGTGGAGATTGCTCCGAAAAATTTCCTCGGTTCATCTTTTTTCAAACAAAGTTATGGCCGAATTTCAACATTTGCGTGAGGAAGAGACAGCAAGACTGACAAGCAAATTGGCAAGTAGTTATTCCGATGCAAAAACTGTGAAATTGGGACAATTATTGAGTGTATGTACAACCAATGCACTTGCTAGGGCTATGTTAGGAAGGAGAGTGTTCAACGAGGAGACTCATGGTAATGACCCAAAAGCTAATGACTTCAAGGATATGATTCTTGAAACAATGGTGTTAGCTGGAGTTTTCAACATTAGTGATTTCATTCCTTCATTGGAATGGTTAGACCTTCAAGGAGTTCAAGCTAAAATGAAAATATTACACAAAAAATTTGATGCATTTTTAACAAACATTATTGAAGAACATGAGACTTCTAATTCTAAAAGTGAGAAACATAAGGATTTGTTGACTACTTTGTTGGCACTTAGAGATGAAGGAGATGATGAAGGAAATAAACTCACTAATACTGAGATCAAAGCTTTGCTTTTGAACATGTTTGTAGCTGGAACAGACACATCATCAAGTACCACAGAATGGGCTATTGCAGAACTGATAAAAAACCCAAAAATTTTAGCCAAGGTCCAACAAGAATTGGACAATGTTGTGGGCCGAGACAGGAACGTGAAAGAAGAGGACATACCAAACTTACCTTACCTACATGCAGTCATAAAAGAAACATTTCGTTTGCATCCATCAACACCTCTTTCCCTTCCAAGAATTGCTTCAGAAAGTTGTGAGATTTTTGGATATCACATTCCGAAAGGTGCGACTGTTTTGATTAACGTATGGGCCATAGCCCGTGACCCAAAGCAATGGAATGACCCATTAGTATTCAACCCCGAAAGATTTTTACCAGGTGGTGACAAGTGTGATGTTGATATTAAGGGAAATGATTTTGAAGTTATACCTTTTGGTGCTGGACGTAGGATTTGTGTTGGGATGAGTCTTGGACTTCGTATGGTTCAACTTTTAACTGCTACGTTGGCCCATTCGTTTAATTGGGAACTTGAAAATGGGCTCAAACCTGAAAAAATGAACATGGATGAGGGTTTTGGACTTACTCTTCAACGAGCTGAGCCATTATCAGTTCACCCTAAACCCAGGCTCTCGCCACACGTGTACTCGTCAGGTTTCTGA 1557 0.4014 MSLWLIAFSTFILSILIYRFLKSTTKSSSSSLPLPPGPKPWPIIGNMPHLGTAPHQSIAALAQIHGPLMHLKLGFVDVIVAASASVAEQFLKVHDANFSSRPPNAAAKNMVYNYQDLVFAPYGPRWRLLRKISSVHLFSNKVMAEFQHLREEETARLTSKLASSYSDAKTVKLGQLLSVCTTNALARAMLGRRVFNEETHGNDPKANDFKDMILETMVLAGVFNISDFIPSLEWLDLQGVQAKMKILHKKFDAFLTNIIEEHETSNSKSEKHKDLLTTLLALRDEGDDEGNKLTNTEIKALLLNMFVAGTDTSSSTTEWAIAELIKNPKILAKVQQELDNVVGRDRNVKEEDIPNLPYLHAVIKETFRLHPSTPLSLPRIASESCEIFGYHIPKGATVLINVWAIARDPKQWNDPLVFNPERFLPGGDKCDVDIKGNDFEVIPFGAGRRICVGMSLGLRMVQLLTATLAHSFNWELENGLKPEKMNMDEGFGLTLQRAEPLSVHPKPRLSPHVYSSGF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06536 518 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vivi3g06536 518 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PANTHER CYTOCHROME P450 98A9 10 515 - -
Vivi3g06536 518 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 Gene3D Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06536 518 FunFam Cytochrome P-450 19 24 506 - -
Vivi3g06536 518 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06536 Vivi-Chr3 179614307 179619889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06536 8 517 Cytochrome P450 AT5G07990 63.938 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06536 K05280 - gmx:547475 787.334