Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06531 ATGTCTCTATGGTTCATTGCACTCTCCACTTTCATATTATCTATCTTAATATACCGTTTTCTCAAATCCACAACAAAATCTTCTTCTTCATCATCACTGCCACTTCCACCTGGACCAAAACCATGGCCTATAATAGGTAACATGCCTCACTTAGGCACTGCACCACACCAATCTCTTGCAGCCTTGGCTCAAATTTATGGTCCTTTAATGCATCTCAAATTAGGGTTTGTTGATGCTGTCGTGGTCGCTTCCGCTACCGTGGCTGAACAATTCTTAAAAGTTCACGATGCTAATTTTAGTAGCCGGCCACCTAATGCCGCAGCTAAAAATATGGTTTATAACTATCAAGACCTTGTGTTTGCTCCTTATGGTCCAAGGTGGAGGTTGCTCCGAAAAATTTCTTCCGTTCATCTGTTTTCCAATAAAGTTATGGCCGAATTTCAACATATACGCGAGGAAGAGGCAGCAAAATTAACAAGCAAATTGGCAAATAATAATTCCGACACAAAAGCTGTGAAATTGGGACAATTATTGAGTGTATGTACAACTAATGCACTTGCTAGAGCTATGTTAGGAAGGAGAGTGTTCAAAGACGATAACAATGATAATGACCCTAAAGCCGATGACTTCAAAAATATGATTCTTGAATCAATGGTGTTAGGTGGAGTTTTCAACATTAGTGACTTTATCCCTTCATTGGAATGGTTAGACCTTCAAGGAGTTCAAGCTAAAATGAAAATATTACACAAGAAATTTGATGCATTTTTAACCAACATTATTGAGGAACATGAAACTTCTAATTCTAAGAGTGAGAAGCATAAGGATTTATTGACTACTTTGTTGGCACTTAGAGATGAAGGAGATGATGATGGGAATAAACTCACTAATATTGAGATCAAAGCACTTCTTTTGAACATGTTTGTAGCTGGAACTGACACATCATCAAGTACTACGGAATGGGCCATTGCAGAACTGATAAAAAACCCAAAAATCTTAGCCCAAGTCCAACAAGAATTGGACAATGTTGTGGGTCGAGACAGGAACGTGAAAGAAGAGGACATACCAAACTTACCTTACCTACATGCAGTCATAAAAGAAGTATTTCGTTTGCATCCATCAACACCTCTTTCCCTTCCAAGAATCGCTTCGGAAAGTTGTGAGATTTTTGGATACCACATTCCAAAGGGTGCCACTGTTTTGGTTAATGTATGGGCCATAGCCCGTGACCCAAAACAATGGACTGACCCATTAGTATTCAAGCCCGAAAGATTCTTACCAGGTGGTGACAAGTGTGATGTTGATATTAAGGGAAAGGATTTTGAAGTTATACCTTTTGGTGCTGGACGTAGAATTTGTGTTGGGATGAGTCTTGGGCTTCGTATGGTTCAACTTTTAACTGCTACGTTGGCCCATTCATTTAATTGGGAACTTGAAAATGGGCTCGAACCTGAAAAGATGAACATGGATGAAGCTTTTGGGCTTACTCTTCAACGAGCTGTGCCATTATCTGTGTACCCTAAGCCTAGGCTCTCGCCTAATGTGTACTCATCAAGTTTCTGA 1560 0.3974 MSLWFIALSTFILSILIYRFLKSTTKSSSSSSLPLPPGPKPWPIIGNMPHLGTAPHQSLAALAQIYGPLMHLKLGFVDAVVVASATVAEQFLKVHDANFSSRPPNAAAKNMVYNYQDLVFAPYGPRWRLLRKISSVHLFSNKVMAEFQHIREEEAAKLTSKLANNNSDTKAVKLGQLLSVCTTNALARAMLGRRVFKDDNNDNDPKADDFKNMILESMVLGGVFNISDFIPSLEWLDLQGVQAKMKILHKKFDAFLTNIIEEHETSNSKSEKHKDLLTTLLALRDEGDDDGNKLTNIEIKALLLNMFVAGTDTSSSTTEWAIAELIKNPKILAQVQQELDNVVGRDRNVKEEDIPNLPYLHAVIKEVFRLHPSTPLSLPRIASESCEIFGYHIPKGATVLVNVWAIARDPKQWTDPLVFKPERFLPGGDKCDVDIKGKDFEVIPFGAGRRICVGMSLGLRMVQLLTATLAHSFNWELENGLEPEKMNMDEAFGLTLQRAVPLSVYPKPRLSPNVYSSSF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06531 519 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vivi3g06531 519 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 SUPERFAMILY Cytochrome P450 36 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 PANTHER CYTOCHROME P450 98A9 5 516 - -
Vivi3g06531 519 Gene3D Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g06531 519 FunFam Cytochrome P450 83B1 23 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06531 Vivi-Chr3 179430403 179435096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06531 10 516 Cytochrome P450 AT5G07990 64.440 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06531 K05280 - gmx:547475 765.763