Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06476 ATGGGAGGGATTGGTAAAACAGCCCTTGCCAAACACCTTTACAATCATCCTCAAGTTAAGGCCAAATTTCAGGTAAGAGTATGGGCAGATTTCTCAGAGCATGTTGATGATTTCTCAAATTATGGGCAGATTTTTAAAACCATTCGTGAATCTATTACTTCACAAACAACCAGAAGTGATACAACTGACATCAATACCATTTACCCAAAATTTTTGATAGTACTTGATGGTGTGTGGAACCCAAGATTTGTCAATTTGACAACCTTACTGATGGATAACTTTAATGCTGGGGAAACAGGAAGTAGGATCATTGTAACATCAAGAGATGAAAGAATTGCAATATCCATGCAAACCTTTCTTTTTGTCCACTATTTGAGACCTTTGGAAATTGAAGATTGGTTGTCCTTATTTTCCAAATATGCATTTGGACCATGTCACAACCGACAAAAATCCCATCTAGAAGAAATCAGTAGGGAAATTGCTAAAAAGTGTGATGGATTACCATTAGCTGCAGTAGCACACGGGCCTCTTCTTCGCATCTTATTGTTCCAAGACGACTGGAATTATGTGCTGGAAAGTAATGTTCGGGATGTAGATTATGAGGTGCACGCTTCTCTCGAACTTAGCTACAATTTTCTTTCTAATCCTTTAAAACAATGTTTTCAATATTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAAGACGGTAGTTCAGTTGTGGATTGCAGCAGACTTACTTCAATCATTGTCCGAAGATCAGGAAAAAGTTGGAGAAGAATATTTTGATGAACTAGTATCAAGGTCATTGATACATCGGCGATCTATTGGTGACAAGGAAAGAAACTTTGAAATGCACAACTTAATCCATGATATGGCTACAGAGGTTTCATCTCCATACTATATCAATATGGACAAACATGACCTACATGATAAGGTGCATAGCTTATCATACAATAGAGAGGCATATGATTCTTATGATAAATTTTATAAATTATATGAATTAAAGTTAAACGGCCTGTTTACTTTTGTAGCATTACCATTACAAGAACAATTGCCTCTTTGTTTGCTATCAAGTAAGGTACTACATGACTTGCTTCCAAGGATGAAACAGTTACTGGTGTTGTCTCTGTCAAACTACAAGAGTATCACCAAGGTTCCCAAGTCTATTGGAAATTTGTTATACATGCAATACTTAAATCTTTCTCACACAAATATTGAGAGTTTGCCTTCTGAAATATGCAAGCTTTACTATCTGCAGTTCTTGTTGCTGGCAGGCTGTAAAAGGCTCACTGAATTGCCGGAGGACATGGGCAAATTGGTTAACCTGCGCTACCTTGACGTTAGTAACACCGCATTGAGGGAGATGCCTGTACAAATAGCAAAACTAAAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTGAATATTGGAGAGCTAGGAAAACTTCTCCACCTACATGGAAAACTTTCAATCTCGCAGCTACAAAATGTTAATGACTCCTTCGAAGTAGATCAAGCCAATATAAAGATGAAAGAACAAATAGATGAGTTAGCTTTGGAATGGGATTGTGATGGTACTACTTTAGATTCACAAATTCAAAGTGTTGTGCTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTCCCCAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTAGGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGATTCTTCATTTCAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGGCTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTGATTGTTGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAAAGAATGTCCTTTACTGGTACAATCAATGCCATTATCTGATCATGTATTCAGGCAACTGATGTTCCCTTTGAATCTTCTTCAACAGCTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACCAAAAACCTTGAAATTTCTGATAATCAGTAACTGTGAAAATCTAGAGTTCCTTCCTCGTGAATACTTGTCCAATTACACATCGCTTGAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTCCTCAAGAGTCTGTTTATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCTCTATATTGCAATGTGGAAGTGTGAGAAGCTTCATTCACTACCAGAAGCAATGAACAGTCTAGCCGGCCTTCGAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTAGTCATAGATGAGTTGCCTAGTAGTTTACAAAAACTGTCTGTTGGCTATGTTGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCACTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTCCAAAACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGCGGAAAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCACATTTCCTCAGTAGTTATTAATGACGAATTGATCACATGA 3066 0.3796 MGGIGKTALAKHLYNHPQVKAKFQVRVWADFSEHVDDFSNYGQIFKTIRESITSQTTRSDTTDINTIYPKFLIVLDGVWNPRFVNLTTLLMDNFNAGETGSRIIVTSRDERIAISMQTFLFVHYLRPLEIEDWLSLFSKYAFGPCHNRQKSHLEEISREIAKKCDGLPLAAVAHGPLLRILLFQDDWNYVLESNVRDVDYEVHASLELSYNFLSNPLKQCFQYCSIFPKKSILEKKTVVQLWIAADLLQSLSEDQEKVGEEYFDELVSRSLIHRRSIGDKERNFEMHNLIHDMATEVSSPYYINMDKHDLHDKVHSLSYNREAYDSYDKFYKLYELKLNGLFTFVALPLQEQLPLCLLSSKVLHDLLPRMKQLLVLSLSNYKSITKVPKSIGNLLYMQYLNLSHTNIESLPSEICKLYYLQFLLLAGCKRLTELPEDMGKLVNLRYLDVSNTALREMPVQIAKLKNLHTLSDFVVSKHNGGLNIGELGKLLHLHGKLSISQLQNVNDSFEVDQANIKMKEQIDELALEWDCDGTTLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDSLFSNMVHLRISNCNDCLGLPSLGKLGNLKELVIEGMQSVETIGIEFYGSGDSSFQPFPSLESLHFENMQEWKEWDLIGDTATTFPNLKTLSLRKCPKLIVGNITEKFPFLTELELKECPLLVQSMPLSDHVFRQLMFPLNLLQQLTIDGIPSSMSFPTNGLPKTLKFLIISNCENLEFLPREYLSNYTSLEELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCNELESFTLGGLATPNLLYIAMWKCEKLHSLPEAMNSLAGLREMEIDNLPNLQSLVIDELPSSLQKLSVGYVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLRKKRGKEWRKIAHISSVVINDELIT 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06476 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Vivi3g06476 1021 Gene3D Ribonuclease Inhibitor 705 1015 IPR032675 -
Vivi3g06476 1021 FunFam Probable disease resistance protein At1g63360 210 296 - -
Vivi3g06476 1021 Gene3D Ribonuclease Inhibitor 349 704 IPR032675 -
Vivi3g06476 1021 Gene3D - 128 214 IPR042197 -
Vivi3g06476 1021 SUPERFAMILY L domain-like 713 995 - -
Vivi3g06476 1021 Pfam NB-ARC domain 1 221 IPR002182 GO:0043531
Vivi3g06476 1021 Gene3D - 1 120 IPR027417 -
Vivi3g06476 1021 SUPERFAMILY L domain-like 286 725 - -
Vivi3g06476 1021 PRINTS Disease resistance protein signature 164 178 - -
Vivi3g06476 1021 PRINTS Disease resistance protein signature 65 79 - -
Vivi3g06476 1021 PRINTS Disease resistance protein signature 656 672 - -
Vivi3g06476 1021 PANTHER DISEASE RESISTANCE PROTEIN RP 1 669 IPR044974 GO:0006952
Vivi3g06476 1021 Gene3D - 215 296 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06476 Vivi-Chr3 178331852 178339644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06476 384 479 WRKY Transcription Factor Family AT4G12020 37.113 1.28e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06476 - - vvo:131632024 1778.45