Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06474 ATGGAGGGTATCCAATTTCAGAGAGAAAATCTGCTGTTCCTCTCAAATTCTGTGAAGCTGTTGTTAGAAAACCATCTTTTTACTGACTTCGCCGATAACTCCAGGTATGACTTTTCATTTTTGAAGAAAACACTGTTGGATCTTCAAGATGTTCTACTTTGTCATGATCTGGAGAAACTCATCCCTATTCCAGCTGTCAACCTATCGCTGGATTCGCTCAGATATGATGTCTTTCATCTTGCTACTTTCTTTGACAAAATCGATTTTTCATTGAGGTATGGTACCTTTAGTATTAAGCTGCTCAAAAATCTTGTTTGTTTAAATCATGCAAATGATGTGATTAATTATAAAACGAAAAGATTAATTGAAATATCACTGGGCTTGAGTTCAGGAGAACAACTAGCTGAATTAAGTCTTTCCAATTCTAATTTGGATGCTGATTCTTCTATTTATGGAAGAGACGCTGATATTCAGAAACTTAAACACCTTTTGTTCTCTCGTGATGATGATGATGGTAAAATAAGAGTGATTTCCATTGTTGGTATGGGAGGGATTGGTAAAACAGCCCTTGCCAAACACCTTTACAATCATCCTCAAGTTAAGGCCAAATTTCAGGTAAGAGTATGGGCAGATTTCTCAGAGCATGTTGATGATTTCTCAAATTATGGGCAGATTTTTAAAACCATTCGTGAATCTATTACTTCACAAACAACCAGAAGTGATACAACTGACATCAATACCATTTACCCAAAATTTTTGATAGTACTTGATGGTGTGTGGAACCCAAGATTTGTCAATTTGACAACCTTACTGATGGATAACTTTAATGCTGGGGAAACAGGAAGTAGGATCATTGTAACATCAAGAGATGAAAGAATTGCAATATCCATGCAAACCTTTCTTTTTGTCCACTATTTGAGACCTTTGGAAATTGAAGATTGGTTGTCCTTATTTTCCAAATATGCATTTGGACCATGTCACAACCGACAAAAATCCCATCTAGAAGAAATCAGTAGGGAAATTGCTAAAAAGTGTGATGGATTACCATTAGCTGCAGTAGCACACGGGCCTCTTCTTCGCATCTTATTGTTCCAAGACGACTGGAATTATGTGCTGGAAAGTAATGTTCGGGATGTAGATTATGAGGTGCACGCTTCTCTCGAACTTAGCTACAATTTTCTTTCTAATCCTTTAAAACAATGTTTTCAATATTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAAGACGGTAGTTCAGTTGTGGATTGCAGCAGACTTACTTCAATCATTGTCCGAAGATCAGGAAAAAGTTGGAGAAGAATATTTTGATGAACTAGTATCAAGGTCATTGATACATCGGCGATCTATTGGTGACAAGGAAAGAAACTTTGAAATGCACAACTTAATCCATGATATGGCTACAGAGGTTTCATCTCCATACTATATCAATATGGACAAACATGACCTACATGATAAGGTGCATAGCTTATCATACAATAGAGAGGCATATGATTCTTATGATAAATTTTATAAATTATATGAATTAAAGTTAAACGGCCTGTTTACTTTTGTAGCATTACCATTACAAGAACAATTGCCTCTTTGTTTGCTATCAAGTAAGGTACTACATGACTTGCTTCCAAGGATGAAACAGTTACTGGTGTTGTCTCTGTCAAACTACAAGAGTATCACCAAGGTTCCCAAGTCTATTGGAAATTTGTTATACATGCAATACTTAAATCTTTCTCACACAAATATTGAGAGTTTGCCTTCTGAAATATGCAAGCTTTACTATCTGCAGTTCTTGTTGCTGGCAGGCTGTAAAAGGCTCACTGAATTGCCGGAGGACATGGGCAAATTGGTTAACCTGCGCTACCTTGACGTTAGTAACACCGCATTGAGGGAGATGCCTGTACAAATAGCAAAACTAAAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTGAATATTGGAGAGCTAGGAAAACTTCTCCACCTACATGGAAAACTTTCAATCTCGCAGCTACAAAATGTTAATGACTCCTTCGAAGTAGATCAAGCCAATATAAAGATGAAAGAACAAATAGATGAGTTAGCTTTGGAATGGGATTGTGATGGTACTACTTTAGATTCACAAATTCAAAGTGTTGTGCTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTCCCCAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTAGGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGATTCTTCATTTCAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGGCTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTGATTGTTGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAAAGAATGTCCTTTACTGGTACAATCAATGCCATTATCTGATCATGTATTCAGGCAACTGATGTTCCCTTTGAATCTTCTTCAACAGCTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACCAAAAACCTTGAAATTTCTGATAATCAGTAACTGTGAAAATCTAGAGTTCCTTCCTCGTGAATACTTGTCCAATTACACATCGCTTGAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTCCTCAAGAGTCTGTTTATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCTCTATATTGCAATGTGGAAGTGTGAGAAGCTTCATTCACTACCAGAAGCAATGAACAGTCTAGCCGGCCTTCGAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTAGTCATAGATGAGTTGCCTAGTAGTTTACAAAAACTGTCTGTTGGCTATGTTGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCACTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTCCAAAACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGCGGAAAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCACATTTCCTCAGTAGTTATTAATGACGAATTGATCACATGA 3609 0.3755 MEGIQFQRENLLFLSNSVKLLLENHLFTDFADNSRYDFSFLKKTLLDLQDVLLCHDLEKLIPIPAVNLSLDSLRYDVFHLATFFDKIDFSLRYGTFSIKLLKNLVCLNHANDVINYKTKRLIEISLGLSSGEQLAELSLSNSNLDADSSIYGRDADIQKLKHLLFSRDDDDGKIRVISIVGMGGIGKTALAKHLYNHPQVKAKFQVRVWADFSEHVDDFSNYGQIFKTIRESITSQTTRSDTTDINTIYPKFLIVLDGVWNPRFVNLTTLLMDNFNAGETGSRIIVTSRDERIAISMQTFLFVHYLRPLEIEDWLSLFSKYAFGPCHNRQKSHLEEISREIAKKCDGLPLAAVAHGPLLRILLFQDDWNYVLESNVRDVDYEVHASLELSYNFLSNPLKQCFQYCSIFPKKSILEKKTVVQLWIAADLLQSLSEDQEKVGEEYFDELVSRSLIHRRSIGDKERNFEMHNLIHDMATEVSSPYYINMDKHDLHDKVHSLSYNREAYDSYDKFYKLYELKLNGLFTFVALPLQEQLPLCLLSSKVLHDLLPRMKQLLVLSLSNYKSITKVPKSIGNLLYMQYLNLSHTNIESLPSEICKLYYLQFLLLAGCKRLTELPEDMGKLVNLRYLDVSNTALREMPVQIAKLKNLHTLSDFVVSKHNGGLNIGELGKLLHLHGKLSISQLQNVNDSFEVDQANIKMKEQIDELALEWDCDGTTLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDSLFSNMVHLRISNCNDCLGLPSLGKLGNLKELVIEGMQSVETIGIEFYGSGDSSFQPFPSLESLHFENMQEWKEWDLIGDTATTFPNLKTLSLRKCPKLIVGNITEKFPFLTELELKECPLLVQSMPLSDHVFRQLMFPLNLLQQLTIDGIPSSMSFPTNGLPKTLKFLIISNCENLEFLPREYLSNYTSLEELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCNELESFTLGGLATPNLLYIAMWKCEKLHSLPEAMNSLAGLREMEIDNLPNLQSLVIDELPSSLQKLSVGYVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLRKKRGKEWRKIAHISSVVINDELIT 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06474 1202 Gene3D Ribonuclease Inhibitor 530 882 IPR032675 -
Vivi3g06474 1202 SUPERFAMILY L domain-like 467 906 - -
Vivi3g06474 1202 Pfam NB-ARC domain 154 402 IPR002182 GO:0043531
Vivi3g06474 1202 Gene3D - 309 395 IPR042197 -
Vivi3g06474 1202 Gene3D - 131 301 IPR027417 -
Vivi3g06474 1202 FunFam Probable disease resistance protein At1g63360 391 477 - -
Vivi3g06474 1202 PANTHER DISEASE RESISTANCE PROTEIN RP 124 850 IPR044974 GO:0006952
Vivi3g06474 1202 PRINTS Disease resistance protein signature 345 359 - -
Vivi3g06474 1202 PRINTS Disease resistance protein signature 176 191 - -
Vivi3g06474 1202 PRINTS Disease resistance protein signature 837 853 - -
Vivi3g06474 1202 PRINTS Disease resistance protein signature 246 260 - -
Vivi3g06474 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Vivi3g06474 1202 Gene3D Ribonuclease Inhibitor 883 1196 IPR032675 -
Vivi3g06474 1202 SUPERFAMILY L domain-like 894 1176 - -
Vivi3g06474 1202 Gene3D - 396 477 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06474 Vivi-Chr3 178331850 178340126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06474 565 660 WRKY Transcription Factor Family AT4G12020 37.113 2.23e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06474 - - vvo:131632024 2059.26