Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06465 ATGTCATATGACAAATTTGATAAATTATACGGAGTAAAAGGTTTGCGTACCTTTCTAGCATTCCCATTACAAGAACAACTGCCTCTTGGTTTGCTATCAAACAAGGTAGTGCATGACTTGCTGCCAAAAATGAAACAATTACGCATGCTGTCTCTGTCAAGCTACAAGAGTATCACCAAGGTTCCCAATTCTATTGGAAATTTGTTAGACCTGCGGTACTTAAATCTTTCTCACACTAATATTGAAAGGCTCCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTATAAGGTTCTTTGAATTGCCGGAGGACATGGGAAAATTGATTAATCTGCGGTACCTTGACGTTAGTAACACCGCATTGAGAGAGATGCCCGTACAAATAGCCAAACTAGAAAATCTCCACACTTTGTCCGACTTTGTTGTCTGCAAACATAATGGTGGATTGAATATTGTAGAGCTAGGAAAACTTCCCCACCTACGTGGAAAACTTTCAATCTCCCAGCTACAAAATGTTAATGACCCCATTGAAGTAGATCGAGCCAATATAAAGATGAAAGAACAAATAGACGAGTTATCTTTGGAATGGGATCTTGGTAGTACTTTTTTAGATTCACAAATTCTTGTACTTGAAAAGTTGCAACCCTCAACGAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTTCCAAAATGGTTAGGTGATTCTTTATTTGGCAACATGGTGTATTTAAGAATCTCGAATTGTAATGATTGTTTATGGCTTCCGCCCCTTGGAAAATTGGGTTATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGGTTCTTCATTTCAACCATTTCCCTCTTTGCAGAGTCTACACTTTGAGAATATGGAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGACTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTAATAGCCGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAGAGAATGTCCTTTATTGGTGCAATCAATTCCATTATCTGATCATGTATTTGGGCAACTAATGTTCCCTCTTAATTCTCTTCAACAACTGACTATAGACGGTTTTCCATCTCTGATGTCGTTCCCAATAACCGGTCTACCAAAAACCTTGAAACTTCTCATAATCAGTAATTGTGAGAATCTAGAATTCCTTCCTCACGATAACTTGCATAATTATGCATCGCTTGAGGAATTGAAAATATCTTATAGTTGTAATTCAATGATATCATTTACCTTAGGCACTCTCCCTGTCCTCAAGAGTCTGCTTATTGAAGGTTGTATAAATTTGAAATCGATATTAAGTGCAGAAGACGAGTCGGAAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAACTGGAGTCATTTCCCCCAGGTGAATTGGCAACTCCAAACCTTGTTTATATTGCACTCTGGAAGTGTGAGAAACTTCTTTCATTGCCAGAAGCAATGAACAATCTAGCTGGACTTCAAGAAATGGAAATTGATAATCTACCAAATCTTCAATCTTTTGTCATAGACGAGTTACCTAGCAGGATACAGAAACTATCTGTTGGCTCTGTTGGTGGGATTATGTGGAATAATGAGCCAACTTGGGAACATCTCACTTGTCTCTCGGAGTTGCGAATTAACGGCGATGATATTGTGAAAACACTGATGGGGCCATTGCTACCTAAAACGCTTGTGAAACTATGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAGGTGGCTTCAACATCTCACTTCTCTCCAAAACCTTGAGATTATTAACGCGCCCAAACTCAAGTCGTTACTGTGA 1938 0.3849 MSYDKFDKLYGVKGLRTFLAFPLQEQLPLGLLSNKVVHDLLPKMKQLRMLSLSSYKSITKVPNSIGNLLDLRYLNLSHTNIERLPSETCKLYHLQFLLLAGCIRFFELPEDMGKLINLRYLDVSNTALREMPVQIAKLENLHTLSDFVVCKHNGGLNIVELGKLPHLRGKLSISQLQNVNDPIEVDRANIKMKEQIDELSLEWDLGSTFLDSQILVLEKLQPSTNLKSLTIKGYGGISFPKWLGDSLFGNMVYLRISNCNDCLWLPPLGKLGYLKELIIEGMQSVETIGIEFYGSGGSSFQPFPSLQSLHFENMEEWKEWDLIGDTTTTFPNLKTLSLRKCPKLIAGNITEKFPFLTELELRECPLLVQSIPLSDHVFGQLMFPLNSLQQLTIDGFPSLMSFPITGLPKTLKLLIISNCENLEFLPHDNLHNYASLEELKISYSCNSMISFTLGTLPVLKSLLIEGCINLKSILSAEDESEKSLSFLRSIKIWDCNELESFPPGELATPNLVYIALWKCEKLLSLPEAMNNLAGLQEMEIDNLPNLQSFVIDELPSRIQKLSVGSVGGIMWNNEPTWEHLTCLSELRINGDDIVKTLMGPLLPKTLVKLCICGLNDTSIDERWLQHLTSLQNLEIINAPKLKSLL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06465 645 Gene3D Ribonuclease Inhibitor 24 381 IPR032675 -
Vivi3g06465 645 Gene3D Ribonuclease Inhibitor 403 567 IPR032675 -
Vivi3g06465 645 ProSiteProfiles Leucine-rich repeat profile. 70 91 IPR001611 GO:0005515
Vivi3g06465 645 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 483 644 - -
Vivi3g06465 645 SUPERFAMILY L domain-like 31 442 - -
Vivi3g06465 645 SMART LRR_typ_2 68 91 IPR003591 -
Vivi3g06465 645 SMART LRR_typ_2 115 138 IPR003591 -
Vivi3g06465 645 SUPERFAMILY L domain-like 385 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06465 Vivi-Chr3 178289962 178291899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06465 39 144 WRKY Transcription Factor Family AT4G12020 34.579 3.49e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06465 - - vvo:131659447 1283.47