Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06464 ATGGACAAACATAACCTAGATGATAGAATGCAAAATTTCTCATACAATAGAGGGACATATGATTCATATGACAAATTTGATAAATTATACGGAGTAAAAGGTTTGCGTACCTTTCTAGCATTCCCATTACAAGAACAACTGCCTCTTGGTTTGCTATCAAACAAGGTAGTGCATGACTTGCTGCCAAAAATGAAACAATTACGCATGCTGTCTCTGTCAAGCTACAAGAGTATCACCAAGGTTCCCAATTCTATTGGAAATTTGTTAGACCTGCGGTACTTAAATCTTTCTCACACTAATATTGAAAGGCTCCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTATAAGGTTCTTTGAATTGCCGGAGGACATGGGAAAATTGATTAATCTGCGGTACCTTGACGTTAGTAACACCGCATTGAGAGAGATGCCCGTACAAATAGCCAAACTAGAAAATCTCCACACTTTGTCCGACTTTGTTGTCTGCAAACATAATGGTGGATTGAATATTGTAGAGCTAGGAAAACTTCCCCACCTACGTGGAAAACTTTCAATCTCCCAGCTACAAAATGTTAATGACCCCATTGAAGTAGATCGAGCCAATATAAAGATGAAAGAACAAATAGACGAGTTATCTTTGGAATGGGATCTTGGTAGTACTTTTTTAGATTCACAAATTCTTGTACTTGAAAAGTTGCAACCCTCAACGAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTTCCAAAATGGTTAGGTGATTCTTTATTTGGCAACATGGTGTATTTAAGAATCTCGAATTGTAATGATTGTTTATGGCTTCCGCCCCTTGGAAAATTGGGTTATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGGTTCTTCATTTCAACCATTTCCCTCTTTGCAGAGTCTACACTTTGAGAATATGGAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGACTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTAATAGCCGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTTGAGTTAAGAGAATGTCCTTTATTGGTGCAATCAATTCCATTATCTGATCATGTATTTGGGCAACTAATGTTCCCTCTTAATTCTCTTCAACAACTGACTATAGACGGTTTTCCATCTCTGATGTCGTTCCCAATAACCGGTCTACCAAAAACCTTGAAACTTCTCATAATCAGTAATTGTGAGAATCTAGAATTCCTTCCTCACGATAACTTGCATAATTATGCATCGCTTGAGGAATTGAAAATATCTTATAGTTGTAATTCAATGATATCATTTACCTTAGGCACTCTCCCTGTCCTCAAGAGTCTGCTTATTGAAGGTTGTATAAATTTGAAATCGATATTAAGTGCAGAAGACGAGTCGGAAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAACTGGAGTCATTTCCCCCAGGTGAATTGGCAACTCCAAACCTTGTTTATATTGCACTCTGGAAGTGTGAGAAACTTCTTTCATTGCCAGAAGCAATGAACAATCTAGCTGGACTTCAAGAAATGGAAATTGATAATCTACCAAATCTTCAATCTTTTGTCATAGACGAGTTACCTAGCAGGATACAGAAACTATCTGTTGGCTCTGTTGGTGGGATTATGTGGAATAATGAGCCAACTTGGGAACATCTCACTTGTCTCTCGGAGTTGCGAATTAACGGCGATGATATTGTGAAAACACTGATGGGGCCATTGCTACCTAAAACGCTTGTGAAACTATGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAGGTGGCTTCAACATCTCACTTCTCTCCAAAACCTTGAGATTATTAACGCGCCCAAACTCAAGTCGTTACTGTGA 1998 0.3829 MDKHNLDDRMQNFSYNRGTYDSYDKFDKLYGVKGLRTFLAFPLQEQLPLGLLSNKVVHDLLPKMKQLRMLSLSSYKSITKVPNSIGNLLDLRYLNLSHTNIERLPSETCKLYHLQFLLLAGCIRFFELPEDMGKLINLRYLDVSNTALREMPVQIAKLENLHTLSDFVVCKHNGGLNIVELGKLPHLRGKLSISQLQNVNDPIEVDRANIKMKEQIDELSLEWDLGSTFLDSQILVLEKLQPSTNLKSLTIKGYGGISFPKWLGDSLFGNMVYLRISNCNDCLWLPPLGKLGYLKELIIEGMQSVETIGIEFYGSGGSSFQPFPSLQSLHFENMEEWKEWDLIGDTTTTFPNLKTLSLRKCPKLIAGNITEKFPFLTELELRECPLLVQSIPLSDHVFGQLMFPLNSLQQLTIDGFPSLMSFPITGLPKTLKLLIISNCENLEFLPHDNLHNYASLEELKISYSCNSMISFTLGTLPVLKSLLIEGCINLKSILSAEDESEKSLSFLRSIKIWDCNELESFPPGELATPNLVYIALWKCEKLLSLPEAMNNLAGLQEMEIDNLPNLQSFVIDELPSRIQKLSVGSVGGIMWNNEPTWEHLTCLSELRINGDDIVKTLMGPLLPKTLVKLCICGLNDTSIDERWLQHLTSLQNLEIINAPKLKSLL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06464 665 ProSiteProfiles Leucine-rich repeat profile. 90 111 IPR001611 GO:0005515
Vivi3g06464 665 Gene3D Ribonuclease Inhibitor 44 394 IPR032675 -
Vivi3g06464 665 SMART LRR_typ_2 88 111 IPR003591 -
Vivi3g06464 665 SMART LRR_typ_2 135 158 IPR003591 -
Vivi3g06464 665 SUPERFAMILY L domain-like 405 663 - -
Vivi3g06464 665 Gene3D Ribonuclease Inhibitor 424 587 IPR032675 -
Vivi3g06464 665 SUPERFAMILY L domain-like 45 463 - -
Vivi3g06464 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 503 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06464 Vivi-Chr3 178284974 178286971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06464 59 164 WRKY Transcription Factor Family AT4G12020 34.579 3.23e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06464 - - vvo:131659447 1329.31