Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06463 ATGGAGGCCATCAAGAGAGAAAAACTGTTGTCACTCTCAAGCTCTGTGACGTTCTTGTTAGAAAAGATTGTTTGTACTCAGCAGGTCGACGCGTTCCGGATCAAGAATGTTAACGCTTCACTTTCGAAAACCGTGAAGGAAACACTGGTGGATCTTCAAGATGTTCTTTATTATGCTAACAACAAACTCATCCCAAATCAAGATAACAACGAATTGCTGGATATGCTGAGACATGATGTTTTTCAAGTTGCCAATTTGCTTGAAAACTCTGGTTTTTTACGGTATGCTACCGTACTTACTGCAAAGCACCTCAAAATTCATTCTCGTTTAACTTTTTTCATTCAACGGATTAAGTCTAAAACGGACAATTTAAATCAAATATTCAAAGGCTTAAGTTCAAGTGGTGATGATGAGTCTTCTATTTATGGAAGACACTCTGATATTCAGAAACTGAAACATCTTTTGTTGTCTACTGATAGCAGAGTGATTTCTATTGTTGGTATGGGAGGGATTGGTAAAACAGCCCTCGCTAAACACCTTTACAATCATCCTCAAGTTAAGGACAAATTTGAGTTCAAACTATGGGCAGATTTCTCAACTGATGTTGATGATTTCAGTGTTTTTGAAAACATTCTTCAATCTATTACTTCACAAACAGCCACAAGTAATGATACAAGTACCATTTACCCTAATTTTTTGCTGGTACTTGATGGTGTGTGGGATGCAAGATCTGTCAATTGGACATTACTTATGGATATCTTTAATGCTGGGGAATCACGAAGTAGGGTCATCGTCACAACACGAGATGAAAGAGTTGCACTATCCATGCAAAACTTTCTTTCTATCCACTATCTCAGACCCTTGAAATTTGAAGATTACTGGTCTTTACTTGCCAAACATGCATTTGGAGCACATAACTACCACCAACGATCCAATCTAGAAGAAATTGGCAGGAAAATTGCAAGAAAGTGTCATGGTTTACCATTAGCTGCAGTAGCACATGGGGCTCTTCTTCGCATCTGGTCAAACCCGTATTCTTGGATTTATGTGCTAGAAAGTCACGTTCGGGATACAACTTATGAGGTGCAACCTTCTCTCGAATTGAGCTACAATTTTCTTTCTGATCCTTTAAAACGATGTTTTCAATATTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAAGATGGTAGTTCAGTTATGGATTGCAGCAGGCTTACTTGAATCAGCGTCCACAGATCAGGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCATTGATACATCGGTGGTCTACTGGTGATGAGGAAATAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTTCAAAAGTTTATTCTTCATGTAGTATCGGTAGGGACAAACATAACCTAGATGATAGGATGCAAAATTTCTCATACAGTAGAGGGACATATGATTCATATGACAAATTTGATAAATTATACAGAGTAAAAGGTCTGCGTTCCTTTCTAGCATTCCCATTACTAGAACAATTGCCTCTTGGTTTGCTATCAAACAAGGTAGTGCATGACTTGCTGCCAACAATGAAACAATTACGCATGTTGTCTTTATCAAGCTACAAGAGTATCACCAAGGTTCCCAAGTCTATTGGAAATTTGATAGATGTTAGTTACCAAATTGTGTAA 1683 0.3755 MEAIKREKLLSLSSSVTFLLEKIVCTQQVDAFRIKNVNASLSKTVKETLVDLQDVLYYANNKLIPNQDNNELLDMLRHDVFQVANLLENSGFLRYATVLTAKHLKIHSRLTFFIQRIKSKTDNLNQIFKGLSSSGDDESSIYGRHSDIQKLKHLLLSTDSRVISIVGMGGIGKTALAKHLYNHPQVKDKFEFKLWADFSTDVDDFSVFENILQSITSQTATSNDTSTIYPNFLLVLDGVWDARSVNWTLLMDIFNAGESRSRVIVTTRDERVALSMQNFLSIHYLRPLKFEDYWSLLAKHAFGAHNYHQRSNLEEIGRKIARKCHGLPLAAVAHGALLRIWSNPYSWIYVLESHVRDTTYEVQPSLELSYNFLSDPLKRCFQYCSIFPKKSILEKKMVVQLWIAAGLLESASTDQEKVGEEYFDELVSRSLIHRWSTGDEEINFGMHNFIHDLASKVYSSCSIGRDKHNLDDRMQNFSYSRGTYDSYDKFDKLYRVKGLRSFLAFPLLEQLPLGLLSNKVVHDLLPTMKQLRMLSLSSYKSITKVPKSIGNLIDVSYQIV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06463 560 Gene3D - 103 282 IPR027417 -
Vivi3g06463 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 384 IPR027417 -
Vivi3g06463 560 Gene3D - 370 457 IPR036388 -
Vivi3g06463 560 Gene3D - 288 369 IPR042197 -
Vivi3g06463 560 PRINTS Disease resistance protein signature 226 240 - -
Vivi3g06463 560 PRINTS Disease resistance protein signature 324 338 - -
Vivi3g06463 560 PRINTS Disease resistance protein signature 162 177 - -
Vivi3g06463 560 PRINTS Disease resistance protein signature 526 542 - -
Vivi3g06463 560 Pfam NB-ARC domain 147 381 IPR002182 GO:0043531
Vivi3g06463 560 PANTHER DISEASE RESISTANCE PROTEIN RP 51 556 IPR044974 GO:0006952
Vivi3g06463 560 FunFam Probable disease resistance protein At1g63360 370 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06463 Vivi-Chr3 178250433 178252115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06463 140 483 WRKY Transcription Factor Family AT5G45050 24.800 2.14e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06463 - - vvo:131632030 814.683