Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06432 ATGTCAGAACAAGATTCTGATTCATGGAGTTTCTTGTTTCTCTGTCTCTTGATCCTTTTCTCAGGTAAACTAGTTCTTGGTGATTATTCATTGGAAACAGACAAAGAAGTACTATTGAAGCTAAAATCCTATTTGCAGAATCAAACAGTTTCAAATAAAGGAGGTTACATAAGATGGAACATGAACACTTCAAATCCTTGTGATTGGTCAGGAATCTCATGCAGCATGATCACAGGAGAAACAAGGGTTGTGAGTGTTGATATTTCAGCGAGCGAGGTTGCAGGTAAGATGTTTGATCATTTTTCTGAGCTAAGCGAACTAGCGCATCTTGATGTCTCGTGGAACACTCTCCGCGGAGAGATTCCTGAGGATTTAATGAAGTGTAGTAATCTTGTGTTTCTCAATTTGTCTCATAATATTCTCGAGGGGGAGATGAATTTGACGGGGTTGAGGAAGTTGAGAACGTTGGATTTGTCGACGAATAGACTTCATGGGGATATTGCGTTGAGTTTTCGTGATAATTGCGATGGTTTGGTTAGTTTGAATGTTTCGGATAATCATTTTTTTGGTAGGATTGATAAGTCTTTTGATGAATGTTCAAGGTTGAAGTATTTGGATTTGAGTACAAATAATATAAGTGGTGCTTTATGGAATGGGATTTCGAGGTTGACAGAGTTTTCTATTTCGGAGAATTTTCTAACTGGGAATGTTTCTTCTCAAGCTTTTCCGATGAATTGTAGTCTTGAAAAATTGGATCTTTCTGTCAACAGATTTTTCGGTAAACCGCCTAAGGAAGTTGCTAACTGTAAGAATTTAGAGATTCTTAATCTTTCTAGTAACAAATTTAGCGGTGAAATACCTCGGGAAATTGGTTCGATTTCTGGTCTTAAATCACTGTTCTTGCAGAATAACACCTTTTCAAGAGATATTCCGGATACACTTTTGAATTTGAGCAATTTGTTCATTTTGGATGTGAGCAGGAACAACTTTGGTGGTGAGGTACAAGAGATTTTCGGTAAATTCAAGCAATTGAAGTTTCTTTTGTTGCACGCAAATTCTTATGTTAAAGGGTTGAATGAATCAGGAATTTTCACATTGACTAATCTTACGAGATTAAACTTATGTTTCAACAACTTCTCAGGTCCGTTACCATCCGAAATCTCTCAAATGTCTGGTCTCATATTCTTAACATTAAGCAACAACAACTTTAATGGAACTATTCCGTCTGAATTAGCGAAGTTGAGTAAATTGCAAGCACTTGAACTTGCTTTCAATAATTTCAGTGGACCAATTCCAGCAAGCTTAGGAAAGTTGAATTCTCTCTTGTGGTTAATGCTTGCAAACAATTCGTTAACCGGTCAAATCCCGCACGAGTTAGGTAACTGTTCAAGTTTGTTATGGTTGAACCTTGCAAACAACAAACTCACCGGAAAGTTTCCTTCTGAGTTGACCGGAATTGGAAGAAATGCTATGGAGACGTTTGAATTAAACCAAAAAAATTTGGTCAGTGTTGTTGCTGGAAATAGCGAATGTTTATCGATGAGAAGTTGGATACCTGCTAATTACCCTCCATTCAGTTTCGTGTATAGTATCTTAACACGGAAAAATTGTAGAGCCCTTTGGGATCGATTACTCAAAGGATACGGAATTTTTCCTATGTGTTCATCAGAACCTTCTTCTAGATCATCTCATAAATTTGGTTATGTTCAGTTAAGTGGTAACATGATTAGTGGAGAAATTCCTTCAGAAATCGGGAACATGGTGAATTTCAGTATGTTGCATTTAGGTGACAATAGATTCAATGGCGAATTCCCAAAAGAGATTGGTGGTTTACCACTTATTGTCTTGAACATGACCAGGAACAAATTTTCAGGTGAAATTCCAACTGAAATCGGTGACATGAAGTGCATGCAGAATCTTGATTTGTCTTGGAACAATTTCTCAGGTGCATTTCCGACAAGTTTGGTCAACTTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTTTGTTATCTGGTACGGTACCTCTAACCGGACATTTGCTTACTTTTGATAAAAATTCCTATTTAGGCGATACCCTCTTAGACCTTCCGAAATTCTTTGATAACACCCCAGATGGAAAAAACAAAACATTACACATACAGATGAAAAAAGCAACAAAATGGTATTTTTTTGTTGCTATAACACTAGCTATTTTGGTTTCTGGACTTCTTTCTCTAACTGTCTACTTCTTGGTGAAAAGTCCGTCCGAGGAACAAAGAAAGTTTCTGCAGGATAAAAACCGAAAGCATAATGATTCAAGTAGCTATGGGTCGTCACAATGGTTATCTGATACTGTCAAGATATTCCATTTGAACAATGTAGTTTTCACACATGCCGACATTTTGGAAGCAACTAGCAACTTCAAAGAAGAGAGAATCATAGGAAAAGGCGGTTTCGGAACGGTTTACAAAGGAGTTTTTCCTGACGGAAGAGTAGTGGCAGTGAAGAAGCTACAAAGGGAAGGAACCGAAGGCGAGAAAGAATTCAAAGCTGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGGTGGCCTCATCCAAATCTTGTCACACTTTACGGTTGGTGCTTATACGGTTCAGAAAAGTTACTAGTTTACGAGTACATAGGAGGTGGAAGTTTGGAAGAGCTAGTAACAGATACGAAAAACTTGACTTATAAAAGGCGGTTAGAAGCCGCGATTGATGTGGCTAAAGCGTTAGTTTATCTACACCATGAATGTTACCCTCCGATCGTGCACAGAGACGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGCAAAGCAAAAGTAACAGATTTCGGGCTTGCTAGAGTAGTCGATGTTGGTGATAGCCACGTGAGTACAGTTGTTGCTGGAACTGTCGGATATGTTGCACCTGAATATGGACTAACATGGCAAGCTACAACAAAAGGCGACGTGTATAGTTTTGGCGTGTTGGTCATGGAGTTAGCGACCGGGAGAAGAGCAGTGGATGGAGGTGAAGAATGTTTGGTTGAATGTGTTAGGCGTGTGATTGGTTCTGGTAGAAATGGATTGAGTCATTTTGGGCTAGTTGGTGGTGCAAAAGAGATGTTTGAGTTGCTTTTTGTTGGAGTAAAGTGCACAAATGACTCACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGATTAAGATATTCAATTCTCATAGAAATTCAAACTATTGA 3240 0.3849 MSEQDSDSWSFLFLCLLILFSGKLVLGDYSLETDKEVLLKLKSYLQNQTVSNKGGYIRWNMNTSNPCDWSGISCSMITGETRVVSVDISASEVAGKMFDHFSELSELAHLDVSWNTLRGEIPEDLMKCSNLVFLNLSHNILEGEMNLTGLRKLRTLDLSTNRLHGDIALSFRDNCDGLVSLNVSDNHFFGRIDKSFDECSRLKYLDLSTNNISGALWNGISRLTEFSISENFLTGNVSSQAFPMNCSLEKLDLSVNRFFGKPPKEVANCKNLEILNLSSNKFSGEIPREIGSISGLKSLFLQNNTFSRDIPDTLLNLSNLFILDVSRNNFGGEVQEIFGKFKQLKFLLLHANSYVKGLNESGIFTLTNLTRLNLCFNNFSGPLPSEISQMSGLIFLTLSNNNFNGTIPSELAKLSKLQALELAFNNFSGPIPASLGKLNSLLWLMLANNSLTGQIPHELGNCSSLLWLNLANNKLTGKFPSELTGIGRNAMETFELNQKNLVSVVAGNSECLSMRSWIPANYPPFSFVYSILTRKNCRALWDRLLKGYGIFPMCSSEPSSRSSHKFGYVQLSGNMISGEIPSEIGNMVNFSMLHLGDNRFNGEFPKEIGGLPLIVLNMTRNKFSGEIPTEIGDMKCMQNLDLSWNNFSGAFPTSLVNLDELSRFNISYNPLLSGTVPLTGHLLTFDKNSYLGDTLLDLPKFFDNTPDGKNKTLHIQMKKATKWYFFVAITLAILVSGLLSLTVYFLVKSPSEEQRKFLQDKNRKHNDSSSYGSSQWLSDTVKIFHLNNVVFTHADILEATSNFKEERIIGKGGFGTVYKGVFPDGRVVAVKKLQREGTEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSEKLLVYEYIGGGSLEELVTDTKNLTYKRRLEAAIDVAKALVYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARVVDVGDSHVSTVVAGTVGYVAPEYGLTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVECVRRVIGSGRNGLSHFGLVGGAKEMFELLFVGVKCTNDSPQNRPNMKEVLAMLIKIFNSHRNSNY 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06432 1079 CDD STKc_IRAK 809 1070 - -
Vivi3g06432 1079 Gene3D Ribonuclease Inhibitor 357 411 IPR032675 -
Vivi3g06432 1079 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 334 - -
Vivi3g06432 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Vivi3g06432 1079 Gene3D Ribonuclease Inhibitor 412 512 IPR032675 -
Vivi3g06432 1079 SUPERFAMILY Protein kinase-like (PK-like) 784 1067 IPR011009 -
Vivi3g06432 1079 SMART LRR_typ_2 438 462 IPR003591 -
Vivi3g06432 1079 SMART LRR_typ_2 104 128 IPR003591 -
Vivi3g06432 1079 SMART LRR_typ_2 366 390 IPR003591 -
Vivi3g06432 1079 SMART LRR_typ_2 150 173 IPR003591 -
Vivi3g06432 1079 SMART LRR_typ_2 293 317 IPR003591 -
Vivi3g06432 1079 FunFam Leucine-rich repeat receptor-like protein kinase 883 1078 - -
Vivi3g06432 1079 Gene3D Transferase(Phosphotransferase) domain 1 884 1078 - -
Vivi3g06432 1079 FunFam Nuclear pore complex protein NUP107 31 194 - -
Vivi3g06432 1079 Pfam Protein kinase domain 803 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06432 1079 FunFam Putative LRR receptor-like serine/threonine-protein kinase 341 502 - -
Vivi3g06432 1079 SUPERFAMILY L domain-like 220 675 - -
Vivi3g06432 1079 FunFam serine/threonine-protein kinase BRI1-like 2 764 882 - -
Vivi3g06432 1079 Gene3D Ribonuclease Inhibitor 557 711 IPR032675 -
Vivi3g06432 1079 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 246 1069 - -
Vivi3g06432 1079 Gene3D Ribonuclease Inhibitor 30 170 IPR032675 -
Vivi3g06432 1079 Gene3D Phosphorylase Kinase; domain 1 766 882 - -
Vivi3g06432 1079 ProSiteProfiles Protein kinase domain profile. 803 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06432 1079 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Vivi3g06432 1079 Pfam Leucine Rich Repeat 271 290 IPR001611 GO:0005515
Vivi3g06432 1079 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Vivi3g06432 1079 Gene3D Ribonuclease Inhibitor 171 356 IPR032675 -
Vivi3g06432 1079 SUPERFAMILY RNI-like 67 311 - -
Vivi3g06432 1079 SMART serkin_6 803 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06432 Vivi-Chr3 175472108 175476182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06432 11 1067 Receptor kinase-like Gene Family AT1G55610 31.521 9.48e-143 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Vivi3g06432 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06432 - - gmx:100813425 1574.3