Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06415 ATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTTGAATGCGTACATTTAAACGAAGATTTCCTTAGTGAGGAGATGATGTTTAGAGTGATGTTTCATACTGCATTTATACGGTCAAATATTTTGGTGCTGAGCCGTGATGAAATCGATATATTGTGGGATACAAAGGATCAGTTCCCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTAATCTAACCACAGTCAATGTGAGTGAAGAAGATGAAAATGAGACAGAAAGCGGTTCCCCTGAGGAATTCTACGAAGTGGAAGAGATTTTCAGCAATGTAGTTGATATACAGGATTCTCCAAAGTTTCGTCAAAATGCAGTAGATGTCTGGAAAGAGTATTCAGATCCTCCTACCTTTCAGGATTCTACGCAAGATGACGGGATTAACCAACAGGTTGAATGGACAGATTCTGTTATTAATGAGGTGAAAGACATCACGGTTGATGATGTGAAATACAAGCTTGATGAGCGTGTAGATTCAGATACTCATGCAGTGAAAGATATTGCTGTGGATGGTGGAGAAAATAAGTTAACTTCCACTGCTGTTACTTTTGATATGACGGAAACTCCGGAGAGACAGGAAGTCACTTTGAATGTGCATGATGAGTTAGCAGTTACGCGAAACAATTATGATGAAGACAATGATGCAACACTTAAAGAATTAGAGCCTGAGGAAGGGCAGCAGACGCATGATCTTGCCGGATCAATATCTGGTGAAAAGAAACAACTTTCTTCAGACTCAAAGCCAGTGGGAGACGTAGTTGCAGAAAAGCAAAAGGCTAAACAGAAAGAACCACGGGGATTTCAGGAAAAACAGGCAAAAGAAAATGCAACAACTAGGTGGATACCTTCTAACAAAGGTTCTTATCAAGATTCAATGCATGTTTCATATCCACCGATAAGGCATAATAGTTTACCACCTGTTTTGTCAAATGCTACCTCTGCGAAGGAGAAAATGACTAATGCCAAAGGAAGACGTATTTCTAGTTCTCGTTCGACAAATGATCTGAAAAGTTGTAATGGGGACAATTCAAAATCTCTAGAAAGCATATGGGAAACTGATTCAAACGCCCAGCTGTCACCATTGACACCAATTACAGAGTCATCTCATCAGTCAGCTACTCAAGCACCACAGTTGAGCTCTGATCAAGTGCTACAACCTCATCTCCCCCCTTTCCCTCCACCCCCACCTCCACCCACATCACCATCTTCTTCCTTGGATGGTAAAGTGTCTACGATACCACAACCGCCGCCTCAACCGCCTCCTCAACCACCAGCACCACCTCCACCTTTTTTGTCAGGTTTTGGCAAGAAAAATGAAGAGATGGACTTACAAACTGCAACTCATCCTCCTCCACCCCCACCTCCGTCTTCATTTTCTGCGCAAAATAGAGGGAGCTCATTACCTCTTTCTACTCACAGGAAGCCCTATTATTCATCAATTGGCATGGTTGGAGAAAATGGTGGTGCTTTACCTCCTTCAATAGGAAGTGTTTTTGCATCAAAAGTTTATAAATTAGTTGATGGAGTCTCTCTTCCCATTCCTCCTCCCCCACCACCTCCACCCCCTTCTTCTCTCCCCCCAAATTATGGAGTTAGATCCATTCCTCCTCCACCACCTCCCCCACCTTCTTTGTCTTATATGGATAGAGCTCCACCACTCCTTCCTCCTATAACACCAACATCACTTAATGCTCCACTACCACCACCTTTAAGTAAATCTCAACCTCCACCTCCACCACCATTGCCGCTTACTCCTTCTTTTTGTAAAGCTCCATCAACCCCACTTGCTATTAGTATAGCTCCACTGCCTCCACCTCTACCTCATTTGAGTGGAGCACGACCTCCACCTCTTCCTTCAACAAGTAAAACACAACCTCCGCCACCACCACCTCTTCCTTCATCAAGTGAAGAACATCCACCACCACCACCACCGCCTCCTTCAATGTCTAACATCCCACCACCCCCACCCCCACCCATACCACCACCACCACCACTTTCTCTATCTTGTAGAGCATCTCTACCACCACCTCTTCCTTCAATTTCTAAGGGCCCCCTACCCCCACCCCCTCCTCCACCATTCTTTGGAACTCCACCATCATCATTTCATCCTAGATCAAGTAGAGCACCTTCACCACCACCTCCTTTGTCCAAGGATCCACCATTCTATAGAGCTCCACCCCCACCCCCACCCCCACCATTCTATGGAACTCCACCACCACCACCACCACCACCACCTCTTTTTTCATCAAGTGGAGTACCTCCAACACCATCTCCTTCATTGCCTAAGGCCCCACCACCCCCACCACCACCACCATATCTTCCTACATTAAGTAGTGAAATACCTCCAACACCACCAACTCTTGCAATGTCTAAGGCCCCACCTTCAGCACTCAATAGAGCTCCACCACCACCACCACCACCACCATATCTTCCTGCATCTAATGGAGCACCTCAACCACCACCACCACCTCCTTCAATGTCTAAGACCCCACCACCACCACCTCCACCATTCTATGGGGCTCCACCAACCCCACCACCACCACCATATCTTCCTGCATCTAGTGGAGCACCATCGCCACCACCACCACCATATCTTCCTACAACTAGTGGAGCACCACCTCCTCCACCTCCCCCTTTTTATGGAGCAACACCACCACCACCACCACCACCTCATTCATTGTCTATGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCGCCACCACCTCCAATGCATGCAACACAGGCACCACCTCCTCCACCACCTCCGGGGGGTCGAGGCCCACCTCCTCCTCCACCTCCAGGTTTTCGAGGCCCACCTCCTCCGCCACCTCCAGGTTTTCGAGGCCCACCTCCTCCGCCACTTCCAGGTGGCCACGGCCCACCTCCTCCTCCACCTCCAGGTGGTCGAGGCCCTGCTCCACCACCGCCTCCTGGAGGTCATGCACCTGGTGCTCCCGCACCTCCTAGACTTCCAGGTGGTGCACCCCCACCACCCGGGGCTGATCCAAGAGGTAGAGGGCGTGGACTTGCTCGTCCTACTGGTGCAGCGGCACCTCGGCGATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAATTGGACAAGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTGTAAATGTTCCAAAACCTGCTGCTGCTGGTGGTAAATCTGGAGGGCTAGGCAAATCCGCAGGATCCAAACCTGAGAAAATTACCTTGGTTGATTTAAGGAGAGCCTATAATACTGAAATAATGCTTACAAAGGTTAAGATGCCTCTACCGGATATGATGGCTGCAGTTCTGGCTTTGGATGACACAGTATTAGATGTTGATCAGGTGGAAAATCTTATTAAATTTTGCCCTACCAAAGAGGAAATGGATCTTTTGAAGGCATATACTGGCAACAAGGAGAATTTGGGAAAGTGCGAACAGTTCTTTATGGAGCTGATGAAAGTGCCACGAGTTGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTGTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGAAGAGGTCCGAAATTCAGTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATGCATTGAATCAAGGAACAGCAAGAGGAGCTGCTGTTGGATTTAAGTTAGATAGCCTTTTAAAGCTCACCGATACTCGTGCTTCTAACAGCAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTACACTCCTTGATTTTCACCTCGACCTAGTTAGCGTAGATACTGCCTCTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCTTCTGAAAGTGATGGCCCAGTATCTGAAGTTTTCCGTAAGACATTGAAAGATTTCGTTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGACGCACTTGCACAGTATTTCAATGAGGATCCCGCCCGTTGTCCTTTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATAAGGATGTTTCTCAAAGCACATGATGATAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCCGAAATAGAAAAGAAGGCTAAGAAGGAGGCTGAAATGGAAAAGGGTAAAGGCAGTGGTTTGACAAGGAAGAGTAAAAAAGATAACGAAGAAGAAAGCTGA 4413 0.4618 MLVKIDIRCRVQGDVVLECVHLNEDFLSEEMMFRVMFHTAFIRSNILVLSRDEIDILWDTKDQFPKDFKSEVLFLDADAVIPNLTTVNVSEEDENETESGSPEEFYEVEEIFSNVVDIQDSPKFRQNAVDVWKEYSDPPTFQDSTQDDGINQQVEWTDSVINEVKDITVDDVKYKLDERVDSDTHAVKDIAVDGGENKLTSTAVTFDMTETPERQEVTLNVHDELAVTRNNYDEDNDATLKELEPEEGQQTHDLAGSISGEKKQLSSDSKPVGDVVAEKQKAKQKEPRGFQEKQAKENATTRWIPSNKGSYQDSMHVSYPPIRHNSLPPVLSNATSAKEKMTNAKGRRISSSRSTNDLKSCNGDNSKSLESIWETDSNAQLSPLTPITESSHQSATQAPQLSSDQVLQPHLPPFPPPPPPPTSPSSSLDGKVSTIPQPPPQPPPQPPAPPPPFLSGFGKKNEEMDLQTATHPPPPPPPSSFSAQNRGSSLPLSTHRKPYYSSIGMVGENGGALPPSIGSVFASKVYKLVDGVSLPIPPPPPPPPPSSLPPNYGVRSIPPPPPPPPSLSYMDRAPPLLPPITPTSLNAPLPPPLSKSQPPPPPPLPLTPSFCKAPSTPLAISIAPLPPPLPHLSGARPPPLPSTSKTQPPPPPPLPSSSEEHPPPPPPPPSMSNIPPPPPPPIPPPPPLSLSCRASLPPPLPSISKGPLPPPPPPPFFGTPPSSFHPRSSRAPSPPPPLSKDPPFYRAPPPPPPPPFYGTPPPPPPPPPLFSSSGVPPTPSPSLPKAPPPPPPPPYLPTLSSEIPPTPPTLAMSKAPPSALNRAPPPPPPPPYLPASNGAPQPPPPPPSMSKTPPPPPPPFYGAPPTPPPPPYLPASSGAPSPPPPPYLPTTSGAPPPPPPPFYGATPPPPPPPHSLSMAPPPPPPPFYGAPPPPPPPMHATQAPPPPPPPGGRGPPPPPPPGFRGPPPPPPPGFRGPPPPPLPGGHGPPPPPPPGGRGPAPPPPPGGHAPGAPAPPRLPGGAPPPPGADPRGRGRGLARPTGAAAPRRSSLKPLHWSKVTRALQGSLWEELQRHGETQIGQEFDVSELEKLFAVNVPKPAAAGGKSGGLGKSAGSKPEKITLVDLRRAYNTEIMLTKVKMPLPDMMAAVLALDDTVLDVDQVENLIKFCPTKEEMDLLKAYTGNKENLGKCEQFFMELMKVPRVESKLRVFCFKIQFQCQITEFNKSLNLVNSACEEVRNSVKLKEIMKKILYLGNALNQGTARGAAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPTLLDFHLDLVSVDTASKIQLKSLAEEMQAITKGLEKVNQELAASESDGPVSEVFRKTLKDFVNEAKSQVDSVTRLYSDVGRNADALAQYFNEDPARCPFEQVTATLLNFIRMFLKAHDDNIKQAELEKKKAEKEAEIEKKAKKEAEMEKGKGSGLTRKSKKDNEEES 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06415 1470 Gene3D Formin, FH2 domain 1060 1455 IPR042201 -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 274 295 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 435 454 - -
Vivi3g06415 1470 Pfam Formin Homology 2 Domain 1047 1416 IPR015425 -
Vivi3g06415 1470 ProSiteProfiles C2 tensin-type domain profile. 1 77 IPR014020 -
Vivi3g06415 1470 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 74 IPR035892 -
Vivi3g06415 1470 Gene3D - 1 79 - -
Vivi3g06415 1470 PANTHER FORMIN-J 955 1448 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 244 517 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 531 1053 - -
Vivi3g06415 1470 SUPERFAMILY Formin homology 2 domain (FH2 domain) 989 1436 - -
Vivi3g06415 1470 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1041 1442 IPR015425 -
Vivi3g06415 1470 SMART PTEN_C2_2 3 76 IPR014020 -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 347 407 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 296 314 - -
Vivi3g06415 1470 Pfam C2 domain of PTEN tumour-suppressor protein 1 74 IPR014020 -
Vivi3g06415 1470 Coils Coil 1417 1451 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 482 496 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 620 812 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 409 425 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 533 610 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 1430 1470 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 819 1030 - -
Vivi3g06415 1470 MobiDBLite consensus disorder prediction 252 266 - -
Vivi3g06415 1470 SMART it6_source 206 1470 IPR015425 -
Vivi3g06415 1470 Coils Coil 1323 1343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06415 Vivi-Chr3 174591300 174602479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06415 1 360 FH2 protein (formin) Gene Family AT5G07740 42.746 5.67e-72 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06415 - - mtr:25488802 707.212