Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06406 ATGCTTTCTTCACCTACGTCTTACATCAAAGGTGGTGTCCCTATAAATGGCCATTTTATAACCTTTTTGCACCGTACACTTGACGAGAAGTACGTGATGGGAATGGAATTGGCCATCAAAACACATTGCAGAAGCATCTCAGCTGAGGAATTTGCTCAGAAAAGAAACTCATGGAGCTTTCTAAACCATAACAGTCCAGTTATCAATGATGCTGCTATTAGTTTGGTTTCCAAGCAGGGTCCATGTTGGTCTGAGCTCAAGTTCACGGGTATGGTGCAGTGGGGCCAACGCAGGCAGGTTCGGTTTCTGGGTCGCAATGAGGAACAAAAGGTTGAATCTTTACACCAACATCATAAGGAAAAAAGGGAAAGGACTTATAACAAGAGAAAGAACGTTGAAGAAGAAATGGAGGCTGTAAAGGTAGCTCCTTTTGGAGTATCGAGGATGACTCGTCAGAGCTTCAAAAATCAACAAGTTATGAGTAGTAGCAGCGGGGCTAAAAAGTCTAAGAAAGCAGTAAACGACACTAAGCAGCAGCAACTCATTGTTTATAGCAAAAAAGGCCGGAAAATATCAATTGACAGATGGTCTGCTGAGAGGTATAAGATGGCAGAGGAGAATATGTTGAAGGTTATGAAGGAAAGGGAAGCTGTGTATGGAAGCCCAATAATGAGGCAAGACTTGAGATCAGAAGCACGAAAGTATATCGGTGACACTGGTTTACTTGATCATTTGCTGAAGCATATGGCTGGAAAAGTGGCACCGGGAGGAGTTGAAAGATTCCGACGACGTCACAATGCTGAAGGTTCAATGGAATACTGGTTAGAGAGTGCGGATCTCGTTGATATCAGAAAAGAAATGGGTGTACAAGATCCTTACTGGACTCCACCACCTGGATGGAAGCCTGGAGACAGCATTTCACCACAACATGTTACTAGAAATGAACTCAGGGAGATAAGGGAGGAAATAATCAAGTTGAAACGAGATATGCTGGATCTCAAATCAAAAAAAGAAGAGGAAGCCTTGGCCATTGTGGCTACTTCTAGTTCTTGTTTGTCAAGTTTGAACTATAGGGACTATGATTCCCAGGTTTCTATGCAGGAGATTTATGCTGAGCTGGTTCATAAAAAGGCTAGAGTTGAAAAACAGCTAAAAGAAATTACTCTGACTTTGAATGACATGGAGGGACAACTTGGAATGCTGAAGCCAACAATGTCAGAATCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACAGAAAACATTGGAGATGTGACAAGAGAGGATGACAGAGGAACAAAATCAGCGGACACACAAATGGTACGAAGCAGCGCAGCAGAGCAAAAGGCAGCAAAGATAGAAAGACTTAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGCATGTCTCCTCATGTTGAGGCTAACCTTGATGAAATCACAGTGGTCCCAACCCCAACCTCAGTTTCCTCTGCTACCACATCAGCCCCCAAGCTTGTCTCCAATTCCAAGACTAAGAACTTGCCACTATCAATACCTTCCCCTTCTTCTGCTGTTAAGCCACTAGCAGAGAAGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGACCCTTTTCCCCTCACCTTTCTCCTCCATTAGAGACAAAATCCACAATTACCAACAAGGATTCTTCTATTAACCTCAATGAGACTCCTCTGGCCCAAGAGTAG 1749 0.4334 MLSSPTSYIKGGVPINGHFITFLHRTLDEKYVMGMELAIKTHCRSISAEEFAQKRNSWSFLNHNSPVINDAAISLVSKQGPCWSELKFTGMVQWGQRRQVRFLGRNEEQKVESLHQHHKEKRERTYNKRKNVEEEMEAVKVAPFGVSRMTRQSFKNQQVMSSSSGAKKSKKAVNDTKQQQLIVYSKKGRKISIDRWSAERYKMAEENMLKVMKEREAVYGSPIMRQDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESADLVDIRKEMGVQDPYWTPPPGWKPGDSISPQHVTRNELREIREEIIKLKRDMLDLKSKKEEEALAIVATSSSCLSSLNYRDYDSQVSMQEIYAELVHKKARVEKQLKEITLTLNDMEGQLGMLKPTMSESLTPPALLLGPTSSLTENIGDVTREDDRGTKSADTQMVRSSAAEQKAAKIERLKSGFKICKPRGTFMWPNMSMSPHVEANLDEITVVPTPTSVSSATTSAPKLVSNSKTKNLPLSIPSPSSAVKPLAEKRPVSTATLTHVTGPFSPHLSPPLETKSTITNKDSSINLNETPLAQE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06406 582 Coils Coil 370 397 - -
Vivi3g06406 582 MobiDBLite consensus disorder prediction 498 582 - -
Vivi3g06406 582 Coils Coil 309 336 - -
Vivi3g06406 582 MobiDBLite consensus disorder prediction 411 452 - -
Vivi3g06406 582 MobiDBLite consensus disorder prediction 498 525 - -
Vivi3g06406 582 MobiDBLite consensus disorder prediction 155 174 - -
Vivi3g06406 582 MobiDBLite consensus disorder prediction 557 582 - -
Vivi3g06406 582 PANTHER PROTEIN DYAD 26 559 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vivi3g06406 582 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06406 Vivi-Chr3 174022890 174025162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06406 191 276 PHD Transcription Factor Family AT5G22260 40.000 9.78e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06406 - - vvo:131593274 956.051