Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06384 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGTAGAGCCATCATCTTCCAACTCAAATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 531 0.4331 MRPPTLNIFPSEPMHVEPSSSNSNANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06384 176 SUPERFAMILY Leucine zipper domain 82 125 IPR046347 GO:0003700|GO:0006355
Vivi3g06384 176 Coils Coil 100 127 - -
Vivi3g06384 176 Gene3D - 80 129 - -
Vivi3g06384 176 MobiDBLite consensus disorder prediction 1 98 - -
Vivi3g06384 176 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 123 IPR004827 GO:0003700|GO:0006355
Vivi3g06384 176 Pfam Basic region leucine zipper 78 122 IPR004827 GO:0003700|GO:0006355
Vivi3g06384 176 PANTHER TRANSCRIPTION FACTOR TGA9 12 139 - -
Vivi3g06384 176 SMART brlzneu 77 150 IPR004827 GO:0003700|GO:0006355
Vivi3g06384 176 CDD bZIP_HBP1b-like 81 133 - -
Vivi3g06384 176 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Vivi3g06384 176 FunFam BZIP family transcription factor 80 129 - -
Vivi3g06384 176 MobiDBLite consensus disorder prediction 14 54 - -
Vivi3g06384 176 MobiDBLite consensus disorder prediction 55 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06384 Vivi-Chr3 171710191 171712714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06384 1 153 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 53.846 2.04e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06384 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06384 K14431 - vvo:131656918 332.798