Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06383 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGTAGAGCCATCATCTTCCAACTCAAATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 603 0.4345 MRPPTLNIFPSEPMHVEPSSSNSNANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKPERNHGKGPTSSSEHEGPKTPDPKPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06383 200 PANTHER TRANSCRIPTION FACTOR TGA9 55 163 - -
Vivi3g06383 200 MobiDBLite consensus disorder prediction 55 107 - -
Vivi3g06383 200 SUPERFAMILY Leucine zipper domain 106 149 IPR046347 GO:0003700|GO:0006355
Vivi3g06383 200 Coils Coil 124 151 - -
Vivi3g06383 200 Gene3D - 104 153 - -
Vivi3g06383 200 SMART brlzneu 101 174 IPR004827 GO:0003700|GO:0006355
Vivi3g06383 200 Pfam bZIP transcription factor 105 140 IPR004827 GO:0003700|GO:0006355
Vivi3g06383 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 103 147 IPR004827 GO:0003700|GO:0006355
Vivi3g06383 200 MobiDBLite consensus disorder prediction 14 54 - -
Vivi3g06383 200 FunFam BZIP family transcription factor 104 153 - -
Vivi3g06383 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 108 123 IPR004827 GO:0003700|GO:0006355
Vivi3g06383 200 MobiDBLite consensus disorder prediction 1 107 - -
Vivi3g06383 200 CDD bZIP_HBP1b-like 105 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06383 Vivi-Chr3 171710191 171712747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06383 1 177 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 46.703 6.10e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06383 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06383 K14431 - vvo:131656918 390.963