Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06381 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 579 0.437 MRPPTLNIFPSEPMHANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKPERNHGKGPTSSSEHEGPKTPDPKQPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06381 192 Coils Coil 116 143 - -
Vivi3g06381 192 SUPERFAMILY Leucine zipper domain 98 141 IPR046347 GO:0003700|GO:0006355
Vivi3g06381 192 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 139 IPR004827 GO:0003700|GO:0006355
Vivi3g06381 192 MobiDBLite consensus disorder prediction 46 99 - -
Vivi3g06381 192 PANTHER TRANSCRIPTION FACTOR TGA9 52 155 - -
Vivi3g06381 192 Pfam Basic region leucine zipper 94 138 IPR004827 GO:0003700|GO:0006355
Vivi3g06381 192 FunFam BZIP family transcription factor 96 145 - -
Vivi3g06381 192 CDD bZIP_HBP1b-like 97 149 - -
Vivi3g06381 192 Gene3D - 96 145 - -
Vivi3g06381 192 SMART brlzneu 93 166 IPR004827 GO:0003700|GO:0006355
Vivi3g06381 192 MobiDBLite consensus disorder prediction 21 45 - -
Vivi3g06381 192 MobiDBLite consensus disorder prediction 1 99 - -
Vivi3g06381 192 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 115 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06381 Vivi-Chr3 171710191 171712756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06381 1 169 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 50.000 1.36e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06381 bZIP_1 2.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06381 K14431 - vvo:131656918 372.859