Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06380 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGTAGAGCCATCATCTTCCAACTCAAATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 606 0.4356 MRPPTLNIFPSEPMHVEPSSSNSNANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKQPERNHGKGPTSSSEHEGPKTPDPKPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06380 201 FunFam BZIP family transcription factor 105 154 - -
Vivi3g06380 201 SMART brlzneu 102 175 IPR004827 GO:0003700|GO:0006355
Vivi3g06380 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
Vivi3g06380 201 PANTHER TRANSCRIPTION FACTOR TGA9 58 164 - -
Vivi3g06380 201 MobiDBLite consensus disorder prediction 14 55 - -
Vivi3g06380 201 MobiDBLite consensus disorder prediction 1 108 - -
Vivi3g06380 201 MobiDBLite consensus disorder prediction 56 108 - -
Vivi3g06380 201 CDD bZIP_HBP1b-like 106 158 - -
Vivi3g06380 201 Gene3D - 105 154 - -
Vivi3g06380 201 SUPERFAMILY Leucine zipper domain 107 150 IPR046347 GO:0003700|GO:0006355
Vivi3g06380 201 Pfam Basic region leucine zipper 103 147 IPR004827 GO:0003700|GO:0006355
Vivi3g06380 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 148 IPR004827 GO:0003700|GO:0006355
Vivi3g06380 201 Coils Coil 125 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06380 Vivi-Chr3 171710191 171712774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06380 1 178 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 49.189 1.63e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06380 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06380 K14431 - vvo:131656918 397.512