Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06379 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGTAGAGCCATCATCTTCCAACTCAAATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 609 0.4368 MRPPTLNIFPSEPMHVEPSSSNSNANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKQPERNHGKGPTSSSEHEGPKTPDPKQPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06379 202 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 149 IPR004827 GO:0003700|GO:0006355
Vivi3g06379 202 Gene3D - 106 155 - -
Vivi3g06379 202 SMART brlzneu 103 176 IPR004827 GO:0003700|GO:0006355
Vivi3g06379 202 PANTHER TRANSCRIPTION FACTOR TGA9 63 165 - -
Vivi3g06379 202 CDD bZIP_HBP1b-like 107 159 - -
Vivi3g06379 202 SUPERFAMILY Leucine zipper domain 108 151 IPR046347 GO:0003700|GO:0006355
Vivi3g06379 202 MobiDBLite consensus disorder prediction 14 55 - -
Vivi3g06379 202 Pfam Basic region leucine zipper 104 148 IPR004827 GO:0003700|GO:0006355
Vivi3g06379 202 FunFam BZIP family transcription factor 106 155 - -
Vivi3g06379 202 Coils Coil 126 153 - -
Vivi3g06379 202 MobiDBLite consensus disorder prediction 1 109 - -
Vivi3g06379 202 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Vivi3g06379 202 MobiDBLite consensus disorder prediction 56 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06379 Vivi-Chr3 171710191 171712777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06379 1 179 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 50.000 2.64e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06379 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06379 K14431 - vvo:131656918 404.06