Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06377 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGTAGAGCCATCATCTTCCAACTCAAATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 534 0.4345 MRPPTLNIFPSEPMHVEPSSSNSNANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKQPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06377 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Vivi3g06377 177 SMART brlzneu 78 151 IPR004827 GO:0003700|GO:0006355
Vivi3g06377 177 MobiDBLite consensus disorder prediction 56 94 - -
Vivi3g06377 177 CDD bZIP_HBP1b-like 82 134 - -
Vivi3g06377 177 MobiDBLite consensus disorder prediction 14 55 - -
Vivi3g06377 177 PANTHER TRANSCRIPTION FACTOR TGA9 12 140 - -
Vivi3g06377 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 124 IPR004827 GO:0003700|GO:0006355
Vivi3g06377 177 FunFam BZIP family transcription factor 81 130 - -
Vivi3g06377 177 Gene3D - 81 130 - -
Vivi3g06377 177 SUPERFAMILY Leucine zipper domain 83 126 IPR046347 GO:0003700|GO:0006355
Vivi3g06377 177 Pfam Basic region leucine zipper 79 123 IPR004827 GO:0003700|GO:0006355
Vivi3g06377 177 Coils Coil 101 128 - -
Vivi3g06377 177 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06377 Vivi-Chr3 171710191 171712780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06377 1 154 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 51.205 1.96e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06377 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06377 K14431 - vvo:131656918 335.109