Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06376 ATGAGGCCACCAACTCTTAACATTTTTCCTTCTGAGCCTATGCATGCTAACATGGAGTTACTTTCTCCGGAAACAAGTGGATCAAGGAAAACCAATCTACCAAAACAAGTCTTCTCTGGCTCTGAACCATCCAAAACTGTCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGCAGCCAGAGAGAAATCATGGTAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGTTGAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAGGCTTAGTCAGATGGAACAAGAGTTACAACGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAGTCATGGGAGGAGAGCAAAACATTCCTATCTCAATGAACAGCATTACCTCAGACATCTGGAGAATTATCTGCAGCCTCACCAGAGAGGTTGTCAATGGCATCTCATGGAAATGTTCGTGGGTATGA 582 0.4381 MRPPTLNIFPSEPMHANMELLSPETSGSRKTNLPKQVFSGSEPSKTVKQPERNHGKGPTSSSEHEGPKTPDPKQPERNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLSQMEQELQRARNQGMFFGGGAVMGGEQNIPISMNSITSDIWRIICSLTREVVNGISWKCSWV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06376 193 SMART brlzneu 94 167 IPR004827 GO:0003700|GO:0006355
Vivi3g06376 193 Gene3D - 97 146 - -
Vivi3g06376 193 SUPERFAMILY Leucine zipper domain 99 142 IPR046347 GO:0003700|GO:0006355
Vivi3g06376 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 140 IPR004827 GO:0003700|GO:0006355
Vivi3g06376 193 FunFam BZIP family transcription factor 97 146 - -
Vivi3g06376 193 CDD bZIP_HBP1b-like 98 150 - -
Vivi3g06376 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 116 IPR004827 GO:0003700|GO:0006355
Vivi3g06376 193 PANTHER TRANSCRIPTION FACTOR TGA9 51 156 - -
Vivi3g06376 193 MobiDBLite consensus disorder prediction 47 100 - -
Vivi3g06376 193 MobiDBLite consensus disorder prediction 1 100 - -
Vivi3g06376 193 MobiDBLite consensus disorder prediction 21 46 - -
Vivi3g06376 193 Pfam Basic region leucine zipper 95 139 IPR004827 GO:0003700|GO:0006355
Vivi3g06376 193 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06376 Vivi-Chr3 171710191 171712864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06376 1 170 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 49.714 8.09e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06376 bZIP_1 2.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06376 K14431 - vvo:131656918 379.407