Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06355 ATGGAGGGTGACATAGCTGTGGGTAACCAGTTTAAAACAAAAGCCGAATGTGTTCGTGCCATCTCTAAATATCATATGAAACAATGTATTGATTTCAAGGTGAATTTTTCTGACAAAAAAAGATATGAAATATGTTGTAGAAACGCTACATGCAAGTTTCGACTTTTGGCGTCCTTTCGAAAGAGGAGCGACCTATGGGAGATAGGCATTATGAACTCACTACATAGTTGTTCAACATCTATGTTCAATCAGGATCATAGGCAACTTAGCTCTCAGATAATGTGTCAACATTTAATGCCCCTTGTTGATAAGGACCCTTCAACTAAGGTGAGCGTATGTATTAGTGAGATTGTGTCTGAATTCAAATTTACTCCGTCGTACAAGAAAACATGGATTGCAAGGAATAAGGCTATCGAACAGGTATACGGTAACTGGGAGAATTCATACAATGAGCTGCCACACTACTTGTTAGCTCTCAAGAAATTTGTTCCTGGTACAGTGGTAGAAATGCAAACACTTCCCGTATATACAGATGACGGAACTGTTGTCAATGGAAAACAAATTTTCCATCGACTTTTCTGGGCATTCCAACCAAGCATTAAAGGGTTTGCATATTGCAAACCTATACTTCAGGTTGATGGTACCTGGTTATATGGTAAGTACAAAGGTACCCTACTAATGGCGGTAGCTCAAGATGGAAATAGTAATATCTTTCCAGTTGCTTTTACTCTTGTGGAGGGGGAGACCGCAGATGGTTGGGGTTTCTTTCTAAAGAACTTGAGAATGCATGTAGCCCCTCATCCTGGCTTGTGTTTGATTTCAGACAGGCATGCATCAATTGAAAGTGCTTACAATAATCCAGAGAATGGTTGGCATGAGCCTCCATCTGTACATGTCTATTGGTACGCTTTGAACCAACCAACATTCCACTACTACCGAAATGAAATTGGTATGGCTAATGGTGATGCTTTAAGATGGCTAGACAATATTCCATTGGAAAAGTGGACGAGGGCATTTGATGGAGGTCGGCGTTGGGGTCACATGACAACAAACCTGGTGGAATCGATGAACTCGGTATTCAAAGGGACACGTAATCTACCTATTATGGCATTGGTGCGTGCAACATACTATAGGATGGGAACACTTTTTGCTGAAAGGGGTGCTAAGTGGAGTGCAGTATTGAGTTCTGGACAAACATTTACAGAAAGTTGCATGAAGGTGAGGAAAGAAGAAACGGCAAAATCCAGCACGCATCATGTAAGAATATTTGACTATAACCATAACACTTTCAGTGTGAAGGAGACAATGGACCATGGTGAAGGAAAGCCTATGGGAGATTACAAGGTAAACCTAAGAGATCTTTGGTGTGACTGTGGAAAGTATCAAGCTTACCGTGTTCCTTGTTCACACGTTATTGCTGCATGTTCTATGGTGCGCCAAGACGCCTATGCTCTACTGTCCGACGATTACAGAGTCTCAAACTTATTCGGTGTTTACAGCACAAGTTTTCCAGTACTACCATTAGATGAGTATTGGCCCTCCTTTGAAGGAGATCAAATTTGTCACAACCCATTGATGCGAAGGAACAAGAAAGGCCGTCCGGTGAGCTCACGTATTAGAACGGAAATGGACAAGTATGATAAGTTAGAGAGAAAATGTGCGTTGTGTCGTCTTCCTGGTCACAACCGAACGAATTGTCCAAATGTTGGAACCAAAATGAAGAATCAGTTTGTTCATGGACTATCTGAAACGATTGTTGGAGTTTTGGGTGGAGGTCAACTTGGTAGCATGCTTTGTCAAGCTGCCACTAAGATAGCAATTAAGATCGTGGTTCTAGATCCTCAGGAGAATTGTCCGGCAAGCTCGTTGTGTTATCAGCACATGGTTGAAAGCTTTGATGACTGTGCAACAGTAGAGGAATTTGCGAAGAGGTGTGGAGTTTTAACTTTTGAAATTGAACACGTCAATGTTACTACATTGAAAAAACTCGAGAAACTCTTAATTATTTCTTTGACTATGCAGGATAAGTATCTGCAAAAGGTTCACTTCTCTAAGCATGGCATTTCAGAGAAAACAGAAAGTATAGTTTATCGTGACTTAAAGCCCAAAAATCTCTTACTTCAGAAGGATGGCCATGTTGTATTAACTGATTTCAATCTATCATTTATTACATCTTGTAAACCCCATGTGTTGGTTTTGTAA 2202 0.4069 MEGDIAVGNQFKTKAECVRAISKYHMKQCIDFKVNFSDKKRYEICCRNATCKFRLLASFRKRSDLWEIGIMNSLHSCSTSMFNQDHRQLSSQIMCQHLMPLVDKDPSTKVSVCISEIVSEFKFTPSYKKTWIARNKAIEQVYGNWENSYNELPHYLLALKKFVPGTVVEMQTLPVYTDDGTVVNGKQIFHRLFWAFQPSIKGFAYCKPILQVDGTWLYGKYKGTLLMAVAQDGNSNIFPVAFTLVEGETADGWGFFLKNLRMHVAPHPGLCLISDRHASIESAYNNPENGWHEPPSVHVYWYALNQPTFHYYRNEIGMANGDALRWLDNIPLEKWTRAFDGGRRWGHMTTNLVESMNSVFKGTRNLPIMALVRATYYRMGTLFAERGAKWSAVLSSGQTFTESCMKVRKEETAKSSTHHVRIFDYNHNTFSVKETMDHGEGKPMGDYKVNLRDLWCDCGKYQAYRVPCSHVIAACSMVRQDAYALLSDDYRVSNLFGVYSTSFPVLPLDEYWPSFEGDQICHNPLMRRNKKGRPVSSRIRTEMDKYDKLERKCALCRLPGHNRTNCPNVGTKMKNQFVHGLSETIVGVLGGGQLGSMLCQAATKIAIKIVVLDPQENCPASSLCYQHMVESFDDCATVEEFAKRCGVLTFEIEHVNVTTLKKLEKLLIISLTMQDKYLQKVHFSKHGISEKTESIVYRDLKPKNLLLQKDGHVVLTDFNLSFITSCKPHVLVL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06355 733 ProSiteProfiles Zinc finger SWIM-type profile. 447 479 IPR007527 GO:0008270
Vivi3g06355 733 Pfam MuDR family transposase 5 68 IPR004332 -
Vivi3g06355 733 ProSiteProfiles Protein kinase domain profile. 583 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g06355 733 Pfam MULE transposase domain 209 286 IPR018289 -
Vivi3g06355 733 SUPERFAMILY Protein kinase-like (PK-like) 645 725 IPR011009 -
Vivi3g06355 733 Gene3D - 574 665 - -
Vivi3g06355 733 SMART 26again6 454 481 IPR006564 GO:0008270
Vivi3g06355 733 SUPERFAMILY PreATP-grasp domain 584 665 IPR016185 -
Vivi3g06355 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Vivi3g06355 733 PANTHER PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7 577 689 - -
Vivi3g06355 733 Gene3D Transferase(Phosphotransferase) domain 1 666 731 - -
Vivi3g06355 733 Pfam SWIM zinc finger 447 477 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06355 Vivi-Chr3 169947273 169955530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06355 695 732 AGC Kinase Gene Family AT5G58140 65.789 2.35e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06355 - - vvo:131659363 1514.59