Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06347 ATGAAGATAAAGAAGCTTAATTTCAGCAAGATATATTCATTTAGAAGTGGTCAAAAACCAAACTTTAGGACAGAAAATCCACAGATTGGAAGACAAGGGTTTTCTAGGGTTGTTTTATGTAATGAACAAGATAGTTTTGAATCAGATTTTAGGAATAGTTATGCTGATAATTCTGTTAGATCAACAAAATATACTGTTGCTAATTTCTTGCCTAAGTCATTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTATTTTCTTGTTACTGGTATCTTGGCTTTCACTAATCTTGCTCCGTATACGGCGGTTAGTGCTATTCTTCCTCTATGTATCATTACTGGAGCAACTATGGTGAAAGAAGGTGTTGAAGATTGGCGTCGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTTCACAAAGGCGATGGAAATTTCGAATATACGGAGTGGAAGAATCTCAAGGTGGGGAATATAGTGAAGGTAAAGAAGGATGAGTTCTTCCCTGCTGATCTCCTATTGCTTTCGTCGAGTTATGACGATGCAGTGTGCTATGTTGAGACTATGAACTTGGATGGGGAGACAAATTTGAAGCTAAAACAAGGATTGGAAGTAACTTCTTCCTTAAACGAGGACTTTAAATTCCGTGATTTCAAAGCGGAGGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCGTTTGTTGGGAGCATGGAGTTTGATAGACAAAAATATCCCCTTTCTCCTCAACAACTTCTTCTACGAGACTCTAAACTTCGTAACACGGACTATGTATATGGAGCAGTCATCTTTACCGGTCATGACACGAAGGTTATTCAAAATGCCACTGACCCTCCTTCGAAAAGAAGCAAAATAGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTTGTGTTTTATTTTTAATTGCTTTCGTTGGTTCTATTCTCTTTGGAATTGTAACTAAACGCGACTTACACAACGGAGTTATGAAAAGATGGTATCTAAGACCAGATGACTCCACCATTTTCTTCGATCCTAAAAGAGTTGCTGCAGCTTCTGTATTTCATTTTTTGACGGCCTTAATGTTATATAACTTCTTCATTCCAATATCCTTGTATTTCTCAATAGAATTGGTCAAAGTCCTTCAATGCATCTTCATTAATCAAGATATCAATATGTACTACGAAGAACTGGACAAACCGGCTCTTGCCCGTACTTCAAACTTGAACGAAGAACTGGGCCAAATTGACACGATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCGGTTGCTGGGGTAGCTTATGGTCGTGGTGTCACCGAGGTTGAGCAAGCCATTAGTAATATAAATAATAATTCACCTATGATACATCAACAAGTTAATAGGTCGGAATCAGAATCAGATGATATCAGAGAAGTTCATGATCGAAAAGAACAGATCAAAGGTTTTAACTTTATGGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTCGTGCCGATGTTATACAAAAGTTTTTCCGTTTATTGTCTGTTTGTCATACCGCCATACCTGAAGTAGATGAAGATACTGGAAGAGTGTCATATGAAGCTGAATCTCCTGATGAAGCCGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGAATAGTTTATCGATGAAAGAGTTGGATCCGGTATCTGGTAATGAAGTTAATAGGACATTCAAGATTCTCAATGTCTTAGAATTCAATAGTTCAAGGAAGAGAATGTCGGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGTTACTCTCTAAAGGTGCCGACAGTGTCATGTTTGAAAGGCTTGCCAAGAGTGGGAGAGAGTTTGAAGAGAAAACTTTGGAACATATGAATGAGTATGCTGATGCAGGTTTAAGAACGTTGATACTGGCATATCGTGAACTCGATGAAGAAGAATATCACGAGTTTGACGATAAATTTTCCGAAGTAAAAAATTCGGTCACTGTAGACCGTGAATCGTTGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGGGCCACTGCTGTAGAGGACAAGCTCCAAAACGGGGTTCCTGAATGTATTGACAAGCTTGCACAGGCTGGAATTAAGATTTGGGTTTTGACTGGGGACAAAATGGAGACAGCCATCAACATTGGTTTTTCTTGTCGTTTGCTTCGACAAGGAATGAAACAGATTATAATTCATTTGGAGATTCCAGATATTCAAGCATTGGAAAAGAATGGAGACAAGAAGGCTATCATCAACGCATCAAGGGAAAGTGTGTATCATCAGATATCGGAAGGTTCTAAACTGCTTTCTGCATCTAAAGGGCCCTCTCAGCAAACATTTGCTCTTATAATTGATGGAAAATCACTTGTTTATGCTCTTGAGGATAATACAAAGAATATGTTTTTAGAGCTTGCAACTCGCTGTGCATCTGTTATCTGCTGTCGCTCTTCACCAAAGCAGAAGGCACTGGTTACTAGACTGGTCAAAGAAGGAACTGGGAAGACAACATTAGCTATTGGTGATGGAGCTAATGATGTAGGAATGCTTCAAGAAGCTGATGTAGGTGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCGCAGTTCCGGTATTTAGAAAGATTACTTCTTGTACACGGACATTGGTGTTACCGGAGGATGTCCACAATGTGTCTTGTTTTCTTCACTTCCTGCCATTGCCCTTGGGGTCTTTGA 2826 0.3875 MKIKKLNFSKIYSFRSGQKPNFRTENPQIGRQGFSRVVLCNEQDSFESDFRNSYADNSVRSTKYTVANFLPKSLFEQFRRVANFYFLVTGILAFTNLAPYTAVSAILPLCIITGATMVKEGVEDWRRKKQDIEVNNRRVIFHKGDGNFEYTEWKNLKVGNIVKVKKDEFFPADLLLLSSSYDDAVCYVETMNLDGETNLKLKQGLEVTSSLNEDFKFRDFKAEVKCEDPNANLYSFVGSMEFDRQKYPLSPQQLLLRDSKLRNTDYVYGAVIFTGHDTKVIQNATDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGIVTKRDLHNGVMKRWYLRPDDSTIFFDPKRVAAASVFHFLTALMLYNFFIPISLYFSIELVKVLQCIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGVTEVEQAISNINNNSPMIHQQVNRSESESDDIREVHDRKEQIKGFNFMDERIMNGNWVNEPRADVIQKFFRLLSVCHTAIPEVDEDTGRVSYEAESPDEAAFVIAAREVGFKFYKRTQNSLSMKELDPVSGNEVNRTFKILNVLEFNSSRKRMSVIVKDEEGRILLLSKGADSVMFERLAKSGREFEEKTLEHMNEYADAGLRTLILAYRELDEEEYHEFDDKFSEVKNSVTVDRESLIEEVSDKIERNLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPDIQALEKNGDKKAIINASRESVYHQISEGSKLLSASKGPSQQTFALIIDGKSLVYALEDNTKNMFLELATRCASVICCRSSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMLQEADVGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSTMCLVFFTSCHCPWGL 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06347 941 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Vivi3g06347 941 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Vivi3g06347 941 FunFam Phospholipid-transporting ATPase 545 703 - -
Vivi3g06347 941 SUPERFAMILY Calcium ATPase, transduction domain A 141 283 IPR008250 -
Vivi3g06347 941 Gene3D - 115 285 - -
Vivi3g06347 941 Gene3D - 549 703 IPR023299 GO:0000166
Vivi3g06347 941 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 932 IPR032630 -
Vivi3g06347 941 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Vivi3g06347 941 SUPERFAMILY HAD-like 418 923 IPR036412 -
Vivi3g06347 941 NCBIfam phospholipid-translocating P-type ATPase 54 932 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi3g06347 941 Pfam Phospholipid-translocating ATPase N-terminal 47 105 IPR032631 -
Vivi3g06347 941 FunFam Phospholipid-transporting ATPase 115 285 - -
Vivi3g06347 941 SFLD p-type atpase 405 919 IPR044492 -
Vivi3g06347 941 Pfam Cation transport ATPase (P-type) 538 629 - -
Vivi3g06347 941 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 935 IPR023298 -
Vivi3g06347 941 Gene3D - 704 908 IPR023214 -
Vivi3g06347 941 FunFam Phospholipid-transporting ATPase 703 908 - -
Vivi3g06347 941 SFLD C1.7: P-type atpase like 405 919 - -
Vivi3g06347 941 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 672 IPR023299 GO:0000166
Vivi3g06347 941 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 932 - -
Vivi3g06347 941 NCBIfam HAD-IC family P-type ATPase 840 935 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06347 Vivi-Chr3 169701505 169707181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06347 6 932 Primary Pumps ATPases AT1G68710 73.605 0.0 1419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06347 K01530 - gmx:100798329 1534.24