Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06344 ATGAACCCCAACCACCATAATTCTTGGTCCAATTTCATGCAAAATTGTGGCATTCCACCAATTATCCCAAATCAACAAAATGCATCCAATAATCCAAACTCACATCATAACTCAAAATTTCAAAATCCTACTTTTATCCCGAATCAACAAAATTATCCACACTTTAGAAATTACCCATATTATTATCAACACTTTCCATCTCAATCAAATAGTCCCACTATGTTTCATGGAGTTCAAATGGATAATAGTCATGTGGAAGCAAATGATCAAGAGCCTGAAACACCACAATTTTGTACTCAAGCTCAAGATGGGTTGGAAACAATCAACCTTGATGAAGAAGTCAAAACTACACCGGTTACGAATATGTTGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAATATTTCAAGGGATCCTATTGTTGGGATTGATCAAAAAGGAGATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAACAACCACCGCCACAAGAATTTTCCAGATAGGAATCCGATGGCACTGAAAGGTCGATGGCATAAAAAGATTAATCCTTGTGTACAAAAGTTTGTTGGGTGCTACAAACAAGCTGTCGCTGTAAAGAAAAGCGGTAGCTCTGAGAGTGACATCGTTTCGGCGGCATGCGATATTTATTATCAAGACGGTCATGAAAAGTTCACATTTCAAAGTGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCGGAACCTTCTGCAAAAAGAACAAAGAGTTCGGCTTCTGTAGCATATTCAACATCTTCTAACCCACCAACGCCAACAAGCGAATACGATCCACCATCGCCGACTTTGTTACATCGTCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAGCCTACTCCTAAATTTGATGCTATGAAAGAGGACTTAAACAAAAAAATTGAATTAATGTCGGGGTTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGATTGATGTTGAGTTGCACGCGGCAAAGATTAATGATTTGCAAATACTCACGAAAGATACAACAAATATGACACAAAGACAACTACAAGATCATGAATTTTTGTGCGGCGTAATTAGAGATAGATATGGAATTAATTGA 1182 0.3782 MNPNHHNSWSNFMQNCGIPPIIPNQQNASNNPNSHHNSKFQNPTFIPNQQNYPHFRNYPYYYQHFPSQSNSPTMFHGVQMDNSHVEANDQEPETPQFCTQAQDGLETINLDEEVKTTPVTNMLKIRFQPKEDELLIQSWLNISRDPIVGIDQKGDSFWKRIGEAYNNHRHKNFPDRNPMALKGRWHKKINPCVQKFVGCYKQAVAVKKSGSSESDIVSAACDIYYQDGHEKFTFQSAWKLLRDEPKWLGGSSEPSAKRTKSSASVAYSTSSNPPTPTSEYDPPSPTLLHRPIGNKAAKRKQKEKFVEKPTPKFDAMKEDLNKKIELMSGFARDYARIESEKMEIERKRIDVELHAAKINDLQILTKDTTNMTQRQLQDHEFLCGVIRDRYGIN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06344 393 PANTHER - 113 383 - -
Vivi3g06344 393 MobiDBLite consensus disorder prediction 254 275 - -
Vivi3g06344 393 MobiDBLite consensus disorder prediction 249 305 - -
Vivi3g06344 393 MobiDBLite consensus disorder prediction 17 46 - -
Vivi3g06344 393 Pfam No apical meristem-associated C-terminal domain 231 375 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06344 Vivi-Chr3 169678172 169679353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06344 126 303 Glutathione S-transferase Gene Family AT5G41240 37.173 1.77e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06344 - - vvo:131642220 461.455