Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06332 ATGATCAAGAAGGTGTTGACAAAGAGTGATCTTGATGATAATTGCAGACTTTTGTTAAATAGAGATTTGGCTAAGAAATGGGTGGTTCCTGTGGTGGATAAAGCTAAAGCTGCAACCGAAGGAGTCGAGGTTGAAGTGTTTGATGTTGACACTGGCTTTCCTCTTTCTCTTAATTTCAAGATACGACCTTCCAATGACAGTCATGTCTTCAACAACACTTGGATCCCAGATTTTGTGGATAGAAGAGGCTTAAAGAAAGGAGATGAAATCGGTCTGAAATGGAATGAAGAGAAGAAAAGATTTGATTTTTCTGTTCTTCATCGATCTTGA 330 0.3848 MIKKVLTKSDLDDNCRLLLNRDLAKKWVVPVVDKAKAATEGVEVEVFDVDTGFPLSLNFKIRPSNDSHVFNNTWIPDFVDRRGLKKGDEIGLKWNEEKKRFDFSVLHRS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06332 109 CDD B3_DNA 1 106 IPR003340 GO:0003677
Vivi3g06332 109 Gene3D - 1 107 IPR015300 -
Vivi3g06332 109 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 108 - -
Vivi3g06332 109 SUPERFAMILY DNA-binding pseudobarrel domain 2 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06332 Vivi-Chr3 169415203 169415532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06332 2 84 B3 DNA Binding Superfamily AT4G03170 30.952 5.53e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06332 - - psat:127081321 197.593