Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06327 ATGGGAAAAGACGCAAAGGCGGGAGGGAAGGGTAAGGGAAAGCAGGCAGCAAGTGGAAGTGATGAGATTGCTTCCAAGGGAAAAGGAAAAGGTGGGAAAGCTGCAGATGGGCTTGGTACTTGCACCTATGTCAAAGCAAGGCACGTCTTATGTGAGAAACAAGGTAAGATTAATGAAGCCTACAAGAAGCTGCAAGATGGTTGGCTTAGCAATGGAGATAAGGTTCCTCCGGCAGAGTTTGCAAAGGTAGCCCAAGAATATTCTGAATGTCCATCAGGAAAGAAGGGTGGAGACCTTGGTTGGTTTCCACGAGGAAAGATGGCTGGCCCGTTTCAGGAAGTTGCCTTCAACACACCTGTTGGAGCTACTAGTGCTCCTTTCAAATCAACGCATGGCTACCATATTATCTTATCTGAAGGAAGAAAGAACTGA 432 0.4699 MGKDAKAGGKGKGKQAASGSDEIASKGKGKGGKAADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06327 143 Gene3D - 42 141 IPR046357 GO:0003755
Vivi3g06327 143 MobiDBLite consensus disorder prediction 1 37 - -
Vivi3g06327 143 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 41 140 IPR000297 GO:0003755
Vivi3g06327 143 Pfam PPIC-type PPIASE domain 43 136 - -
Vivi3g06327 143 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 80 100 IPR023058 -
Vivi3g06327 143 SUPERFAMILY FKBP-like 40 137 - -
Vivi3g06327 143 PANTHER - 1 143 IPR043323 GO:0003677|GO:0003755|GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06327 Vivi-Chr3 169398350 169400867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06327 44 139 Sulfurtransferasese or Rhodanese AT5G19370 32.653 2.18e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06327 K09579 - qsu:111983187 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g06327 3 169398350 169400867 Vivi3g06327 3 169398350 169400867 ECH