Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06319 ATGGATTTCGTGAAGAAGTGTAAGATAGTATTGAGAAGTAACAAGAGCATGAAGAAGCAAAAAGATAATCCTAAGAAACCACCACATGGTTGTCTTTGTGTCTATGTTGGAGCTGAGAGACAGAGATTCATAATAAAGATCAAAATATTGAATCATCATTTGTTCAAGTCACTTCTAGAAGATGTTGAGAATGAATATGGATATGGAAACAATGGTCCTCTATGGCTTCCTTGCGACGTTAACATTTTCTGTGAAGCACTTATGGAGATAAAAAGTGCTATGAGTGACATGGGTTGCAATTTTCACACAGTAGCTACTACTCATTACTTGGAAATACCAATGTACCAAGAATGCCAAAGGTAA 363 0.3609 MDFVKKCKIVLRSNKSMKKQKDNPKKPPHGCLCVYVGAERQRFIIKIKILNHHLFKSLLEDVENEYGYGNNGPLWLPCDVNIFCEALMEIKSAMSDMGCNFHTVATTHYLEIPMYQECQR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06319 120 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
Vivi3g06319 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06319 Vivi-Chr3 168865937 168866299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06319 24 83 Calmodulin-binding Proteins AT3G43120 51.667 8.14e-16 67.4