Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06302 ATGGAGAATGTTGATCAACTCCCTGTTTGGAAATATGATCATGCAATGCAAGATTATGATCCAATTCTACCTCCTTTTCCATCTTCATATGATAATCATAATAATTATCTTTACAGAGGCAACTCAAGTGATGATTATATTTCAAAAGATTGGTTGTCACATTATGGATTTCCCATGCATGATACCCATTTTGATGCTATCCCTGTCAAGGAATATTGTCATCCTGAATACCAATATGAGACTTTTCCTAATGAAATATCAACACAAATAAGCATACAAGACTATGGTTTTTGTGATGCTAAAAATGAGGTTTCAACGTGGAGTGAATTTGATGCTGGGTTTATTTCCGAGAAAAATATGTTTTCTATTGGCAACAATATTGGAGAAAAGAATGCAATGGAAAATGTGAAGGGTAAACGATGTAGAGAAGAGAATACTAATAGTGCAAGAATGTTAACTAGGAAGAATATTTCTGAGTTCTTCTACATGCCGATATCTCAAGCTGCAAGACAACTCAATGTTGGACTTACACATTTGAAGAAAAGGTGTAGGGATCTTGGAATTCAAAGGTGGCCACATAGGAAACTAATGAGTCTTCAAACCCTAATTAAGAATGTTCAAGAGCAGGGTAATGAAAATGATGAAAAAATAAGGAATGCAGTGGAAATATTGCAGAAAGAAATGAAGAAGGTGGAGGAAAAACCAGATTTGCAACTTGAAGAAAACACAAAAAGGCTTAGACAAGCATGTTTCAAGGCTAATTACAAGAAGAGAAGATTAATGGTCATGAGATTAATGGATCAGCAGCATTCTTCTTTAAGTGAGAGTGAAAGTGTTAATAATTACAAAATGGAATAG 858 0.3427 MENVDQLPVWKYDHAMQDYDPILPPFPSSYDNHNNYLYRGNSSDDYISKDWLSHYGFPMHDTHFDAIPVKEYCHPEYQYETFPNEISTQISIQDYGFCDAKNEVSTWSEFDAGFISEKNMFSIGNNIGEKNAMENVKGKRCREENTNSARMLTRKNISEFFYMPISQAARQLNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEQGNENDEKIRNAVEILQKEMKKVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMRLMDQQHSSLSESESVNNYKME 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06302 285 ProSiteProfiles RWP-RK domain profile. 133 220 IPR003035 -
Vivi3g06302 285 Pfam RWP-RK domain 152 199 IPR003035 -
Vivi3g06302 285 Coils Coil 214 234 - -
Vivi3g06302 285 PANTHER PROTEIN RKD4 144 280 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06302 Vivi-Chr3 167424280 167425645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06302 111 259 AtRKD Transcription Factor Family AT1G18790 54.487 3.98e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vivi3g06302 RWP-RK 2.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06302 - - psat:127081291 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g06302 3 167424280 167425645 Vivi3g06302 3 167424280 167425645 ECH